Nonomuraea gerenzanensis: LCN96_27770
Help
Entry
LCN96_27770 CDS
T07782
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCN96_27770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_27770
Enzymes [BR:
ngn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LCN96_27770
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCN96_27770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
HHH
AAA_22
Helicase_RecD
PIF1
PhoH
nSTAND3
HHH_3
UvrD-helicase
HHH_2
AAA_16
UvrD_C
DEAD
TrwB_AAD_bind
NPHP3_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UBU18675
LinkDB
All DBs
Position
complement(5939275..5941488)
Genome browser
AA seq
737 aa
AA seq
DB search
MKQGAEGPPASTIDAVLERITYANEETGYTIARVATERSGADLLTVVGPLLGAQVGESLR
LRGRWTSHPRYGRQFEVWSYSTVLPATVQGIRRYLGSGLIKGIGPKMAERIVDHFGTATL
DVIEQQPERLVEVPGLGPKRTKMIAAAWEEQKIIKEVMIFLQGVGVSTSIAVRIFKQYGD
TSISVVKSQPYKLADDVWGIGFKTADTIAQAVGIPHDSPERVKAGLRYTLSQAADDGHCY
LPAPNLVADAVKILDVPPDLITGCLEELVAEEGVVRELVPAGDNDVPAVYLPPFHRAETA
LAGGLLTLLRHGHDRLKAFADVDWERAETWLHGQTGAELADEQRQAVRLALTEKVAVLTG
GPGCGKSFTVRSIVLLARAKRARVILAAPTGRAAKRLAELTGHEATTVHRLLQLRPGGEA
TFDRDNPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLFVGDVDQLPSVGAGEVLKDL
LAADDIPRVRLTQIFRQAQESGVVVNAHRVNTGRHPVLEGMADFFLFPCEEPEEIAQLTV
DVVARRIPRRFRLDPRRDVQVLAPMHRGAAGAGALNTALQEALTPAREGMPERRYGGRVF
RVGDKVTQLRNNYDKGAAGVFNGTVGIVTDIRPDEHKLTVLTDEDEAVDYAFDELDELAH
AYAVSIHRSQGSEYPAVVIPLATSAWMMLQRNLLYTAITRAKKLVVIVGSRRALAQAVRT
KGAGRRHTGLTHRLTRR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcaaggggcggagggtcctcccgcgtcgacgatcgacgcggtcctcgaacgcatc
acctacgccaacgaggagaccggctacaccatcgcccgcgtggccaccgaacgctccggc
gccgacctgctgaccgtcgtcggccccctgctcggcgcgcaggtcggcgagtcgctgcgg
ctgcgcggccgctggacctcccacccgcgctacggccgccagttcgaggtgtggtcctac
tccaccgtgctgcccgccaccgtccagggcatccgccgctacctgggctccggcctgatc
aagggcatcggccccaagatggccgagcggatcgtcgaccacttcggcaccgccaccctg
gacgtcatcgagcagcagcccgaacgcctggtggaggtgccggggctgggccccaagcgg
acgaagatgatcgccgccgcctgggaggaacagaagatcatcaaggaggtgatgatcttc
ctgcagggggtcggcgtgtccacctccatcgccgtgcgcatcttcaagcagtacggcgac
acctccatctccgtcgtcaagagccagccgtacaagctggccgacgacgtgtggggcatc
ggcttcaagaccgccgacaccatcgcccaggccgtcggcatcccccacgacagccccgaa
cgcgtcaaggccgggctgcgctacaccctgtcgcaggccgccgacgacggccactgctac
ctgccggcgcccaacctcgtcgccgacgccgtcaagatcctcgacgtgccgcccgacctg
atcaccggctgcctggaggagctcgtcgccgaggagggcgtcgtgcgcgagctggtcccc
gccggtgacaacgacgtcccggccgtctacctgccgcccttccaccgcgccgagaccgcc
ctggccggcggcctgctcaccctgctgcgccacggccacgaccggctcaaggcgttcgcc
gacgtcgactgggagcgcgccgagacctggctgcacggccagaccggcgccgagctggcc
gacgagcagcgccaggccgtccggctggcgctcaccgagaaggtcgccgtgctgaccggc
ggccccggctgcggcaagagcttcaccgtgcgctccatcgtgctgctggcccgcgccaag
cgcgccagggtcatcctggccgcacccaccggccgggccgccaagcgcctggccgagctg
accggccacgaggccaccaccgtgcaccggctgctgcagctgcgccccggcggcgaggcc
accttcgaccgcgacaaccccctggacgccgacctggtggtggtggacgaggcgtccatg
ctcgacctgctgctggccaacaagctcgtcaaggccgtcgcccccggcgcgcacctgctg
ttcgtgggggacgtggaccagctgccgtccgtcggcgccggcgaagtgctcaaggacctg
ctggccgccgacgacatcccgcgcgtgcgcctgacccagatcttccgccaggcgcaggag
tcgggcgtcgtcgtcaacgcccaccgcgtcaacaccggccgccaccccgtcctggagggc
atggccgacttcttcctgttcccctgcgaggagccggaggagatcgcccagctgaccgtg
gacgtcgtggcccgccgcatcccgcgccgcttccgcctcgacccgcgccgcgacgtgcag
gtcctggcccccatgcaccggggcgccgccggcgcgggcgccctgaacaccgccctgcag
gaggcgttgacgcccgcccgcgagggcatgcccgagcgccgctacggcgggcgcgtcttc
cgcgtcggcgacaaggtcacccagctgcgcaacaactacgacaagggcgcggcgggcgtg
ttcaacggcaccgtcgggatcgtcaccgacatccgccccgacgagcacaagctgaccgtc
ctgaccgacgaggacgaagcggtcgactacgccttcgacgagctcgacgagctggcccac
gcctacgccgtctccatccaccgctcccagggcagcgagtaccccgccgtcgtcatcccg
ctggccaccagcgcctggatgatgctgcagcgcaacctgctctacaccgccatcacgcgg
gccaagaagctcgtcgtcatcgtcggctcgcggcgcgcgctggcgcaggccgtgcggacg
aagggggcgggccgccgccacaccggcctgacccaccggctgacgcgccgctga
DBGET
integrated database retrieval system
