Nonomuraea gerenzanensis: LCN96_35135
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Entry
LCN96_35135 CDS
T07782
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ngn03051
]
LCN96_35135 (pafA)
Enzymes [BR:
ngn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LCN96_35135 (pafA)
Proteasome [BR:
ngn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LCN96_35135 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UBU09584
LinkDB
All DBs
Position
complement(7583291..7584649)
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AA seq
452 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVIELVTHDKAGERILEGLLVDAEKRLREEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRHGEFGRLADVLIPFLVTRQIVCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTMLLKVGATDLVLRMIESGTVM
RDLSLENPIRAIREVSHDMTGRRRVRLANGREASSLEIQQEYLSKAKDFVDRRGGDAIAH
RVLELWERTLNAVDTGNLDLVSREIDWVTKYQLIERYRRKYDLPLSSPRVAQLDLAYHDV
HRKRGLYYLLQKRGSVERVASDLKIFEAKSVPPQTTRARLRGEFIRKAQEKRRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDKLIAGM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgcatcttcgggctggagaacgagtacggcgtgacctgcacgttcaggggg
cagcgcaggttgtcccccgacgaggtcgcgcgctacctgttccggcgggtcgtgtcctgg
ggccgatcgagcaacgtcttcctccgtaacggcgcgcgtctctacctcgacgtgggcagc
catcctgagtacgcaacacccgaatgtgacaacgtcatcgagctcgtcacccacgacaag
gcgggcgagcgcatccttgagggcctgctcgtggacgccgagaagcggctgcgcgaagag
ggcatcgccggtgacatctacctgttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactacctggtcggccggcacggggagttcggccggctggccgacgtg
ctgatcccgttcctggtgacgcggcagatcgtgtgcggggcgggcaaggtgctgcagacg
ccgcgcggcgccgtctactgcgtctcgcagcgggccgagcacatctgggagggcgtctcc
agcgccaccacccgctcgcgcccgatcatcaacaccagggacgagccgcacgccgacgcc
gagcggttccgccgcctgcacgtcatcgtcggcgactccaacatgagcgagaccacgatg
ctgctcaaggtcggcgccaccgacctggtgctgcgcatgatcgagtcgggcacggtgatg
cgcgacctgtcgctggagaacccgatcagggccatccgcgaggtctcccacgacatgacg
gggcggcgccgggtgcgcctggccaacgggcgcgaggcgtccagcctggagatccagcag
gagtacctgtcgaaggcgaaggacttcgtcgaccgccgcggcggcgacgccatcgcgcac
cgggtgctggagctgtgggagcgcaccctcaacgcggtcgacacgggcaacctcgacctg
gtctcgcgggagatcgactgggtgaccaagtaccagctcatcgagcggtaccggcgcaag
tacgacctgccgctgtcctcgccgcgggtggcgcagctcgacctggcctaccacgacgtg
caccgcaagcgcggcctgtactacctgctgcagaagcgcggctcggtggagcgggtggcg
tccgacctgaagatcttcgaggccaagtcggtgccgccgcagaccacgcgggcgcggctg
cgcggcgagttcatccgcaaggcgcaggagaagcggcgcgacttcaccgtcgactgggtc
cacctcaagctgaacgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgcagc
gtggacgagcgggtggacaagctcatcgcgggcatgtag
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