Nonomuraea gerenzanensis: LCN96_36260
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Entry
LCN96_36260 CDS
T07782
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCN96_36260 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_36260 (uvrA)
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCN96_36260 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCN96_36260 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
nSTAND1
AAA_23
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
AAA_22
nSTAND3
NACHT
ATPase
cobW
Viral_helicase1
FtsK_SpoIIIE
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
UBU09789
LinkDB
All DBs
Position
complement(7832346..7835186)
Genome browser
AA seq
946 aa
AA seq
DB search
MADRLIVRGAREHNLKDVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKATSKNPRSTVGTITEVYDYLRLLWARIGKPH
CPVCERPIARQTPQQIVDRVMELEEGTRFQVLAPVIRQRKGEYLELFRELQTKGFARARV
DGTVVRLEEPPTLKKYEKHDIEVIVDRLSVKESARRRLTDSVETALQLSGGTITLEFVDL
PEDDPGRERFYSEHLYCPYDDLSFEEMEPRSFSFNSPFGACPECTGLGTKMEVDPDLVVP
DPERELGEGALHPWSGGHTSEYFSRLIEALGHAMGFTLETPWERLPKKAQKSLLYGHDEQ
VHVRYSNRFGRQRSYYTTYDGVIPWVQRRHAEAESDAARERFEGYMREIPCPACKGARLK
PVSLAVTVSGKSIAEVSGMSIGECAKFLAALKLSDRDMQIAERVVKEINARMGFLLDVGL
DYLTMDRAAATLAGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNMRLLDTLIRLR
DMGNTLIVVEHDEDTIAAADWVVDIGPGAGEHGGQVVVSGTVQDLLASEESMTGAYLSGR
RSIPIPAKRRKRDKKRQITVKGAREHNLQGVDIEFPLGVFTAVTGVSGSGKSTLVNDILY
NALAKELNGARTVPGRHSRINGMDQVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ATTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKTIAEVLDMPIEEALGFFDAIPAIKRHLQTLNDVGLGYVRLGQPATTLSGGEAQ
RVKLASELQRRQTGRTIYVLDEPTTGLHFEDIRRLLGVLGRLVDGGNTVIVIEHNLDVIK
TADWIIDMGPEGGSRGGTLVASGTPEEVALVDESHTGRFLRKILAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaccgcctcatcgtgcgtggtgcacgagaacacaacctcaaggacgtctcgctc
gacctgccgcgagactcgctgatcgtcttcaccggcctgtccggctcgggcaagtcgagc
ctggccttcgacacgatcttcgctgagggccagcggcgctacgtcgaatccctgtcggcg
tacgcccgccagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctg
tcgcccgccgtctccatcgaccagaaggccaccagcaagaacccccgctcgaccgtcggc
accatcaccgaggtctacgactacctgcggctgctgtgggcgcgcatcggaaagccgcac
tgcccggtgtgcgagcggccgatcgcccggcagacgccgcagcagatcgtcgaccgcgtg
atggagctggaggagggcacccgcttccaggtgctcgcgccggtgatcaggcagcgcaag
ggcgagtatctcgagctgttccgcgagttgcagaccaagggcttcgcccgggctcgggtc
gacggcaccgtggtgcggctggaggagccgccgacgctgaagaagtacgagaagcacgac
atcgaggtcatcgtcgaccgcctgtcggtcaaggagtcggcgcggcgccggctcaccgac
tcggtcgagaccgcgctgcagctgtcgggtggcacgatcacgctcgagttcgtcgacctg
ccggaggacgacccgggccgcgagcggttctactccgagcacctctactgtccttacgac
gacctgtcgttcgaggagatggagccgcgctcgttctccttcaactcgccgttcggcgcc
tgccccgagtgcacgggcctgggcacgaagatggaggtggaccccgacctggtggtgccc
gaccccgagcgcgagctcggcgagggcgcgctgcacccgtggtccggcggccacaccagc
gagtacttctcccggctgatcgaggcgctgggccacgcgatgggcttcacgctcgagacg
ccgtgggagcggctgccgaagaaggcgcagaagtcgctgctgtacggccacgacgagcag
gtgcacgtccgctacagcaaccgcttcggccgccagcgctcctactacaccacctacgac
ggcgtcatcccgtgggtgcagcgccggcacgccgaggccgagagcgacgccgcgcgcgag
cggttcgaaggctacatgcgcgagatcccgtgcccggcctgcaagggggccaggctcaag
ccggtcagcctcgcggtgaccgtgtcgggcaagtcgatcgccgaggtgtcgggcatgtcg
atcggcgagtgcgccaagttcctggccgcgctcaagctgtccgaccgcgacatgcagatc
gccgagcgggtggtcaaggagatcaacgcccgcatgggcttcctgctcgacgtcggcctc
gactatctgaccatggaccgcgccgccgccaccctggcgggcggcgaggcccagcgcatc
cggctggccacgcagatcggctccggcctggtcggcgtcctgtacgtgctggacgagccg
tccatcggcctgcaccagcgcgacaacatgcgcctgctcgacacgctcatcaggctgcgc
gacatgggcaacacgctcatcgtcgtcgagcacgacgaggacacgatcgcggcggccgac
tgggtcgtcgacatcggccccggcgcgggcgagcacggcggccaggtcgtggtctcgggc
accgtccaggacctcctcgccagcgaggagtcgatgacgggggcgtacctgtcgggccgc
aggagcatcccgatccccgccaagcgccgcaagcgcgacaagaagcggcagatcacggtg
aagggcgcgcgcgagcacaacctccagggcgtggacatcgagttcccgctgggcgtgttc
acggccgtcaccggggtgtcggggtccgggaagtcgacgctggtcaacgacatcctctac
aacgcgctggccaaggagctcaacggcgcccgcaccgtgccggggcggcactcgcggatc
aacggcatggaccaggtcgacaaggtcgtgcacgtggaccagtcgccgatcgggcgcacg
ccgcgctccaacccggccacctacaccggggtcttcgaccacgtgcgcaagctgttcgcc
gccacgacggaggcgaaggtgcgcggctaccagcccgggcgcttcagcttcaacgtcaag
ggcgggcgctgcgaggcgtgcgcgggcgacggcaccatcaagatcgagatgaacttcctg
ccggacgtctacgtcccctgcgaggtctgccacggcgcccgctacaaccgggagacgctg
gaggtccactacaagggcaagaccatcgcagaggtgctcgacatgccgatcgaggaggcc
ctgggcttcttcgacgcgatccccgcgatcaagcggcacctgcagacactcaacgacgtc
ggcctggggtacgtgcggctggggcagccggccaccacgctgtccggcggtgaggcgcag
cgggtcaagctcgcctccgagctgcagcggcggcagaccgggcggaccatctacgtcctc
gacgagcccaccaccgggctgcacttcgaggacatccggcggctgctcggggtgctcggg
cggctggtggacggcgggaacacggtgatcgtcatcgagcacaacctcgatgtgatcaag
accgccgactggatcatcgacatggggcccgagggcgggtcccggggtggcaccttggtg
gccagcgggacaccggaggaggtcgcgctggtggacgagagccacacggggcgcttcctg
cgcaagatcctcgcgcactga
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