Nonomuraea gerenzanensis: LCN96_38465
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Entry
LCN96_38465 CDS
T07782
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn02024
Quorum sensing
ngn03060
Protein export
ngn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LCN96_38465 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LCN96_38465 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCN96_38465 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ngn02044
]
LCN96_38465 (secD)
Secretion system [BR:
ngn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LCN96_38465 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UBU10208
LinkDB
All DBs
Position
complement(8273808..8276054)
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AA seq
748 aa
AA seq
DB search
MFRAPFWRAVTACAVIVISLIVTLATAPRLGLDLRGGTQLVFESKSSPTVQADAAATDRA
LDVLRQRADALGVVDPTLVRSGERRIIVELPGVLDPRQAAEVIGRTAQLAFHSVLGAAEP
GDTSAVRDENGGLLKLGPAVITGDGVRDAAEQSDPQRGPGWWVSLDFREEAPWRKLTADA
ACHPQDDPRRRIAIALDGQVISSPPVDPSIACGAGIPGGSAQITGSYTHEEARDLAVLIK
GGALPVPLDLVEQRTVGPTLGAAAIDASAKAAIAGLILTAVFIVAVYRLAGLLSVLALLC
YGVISYAALVAMGATFTLPGLAGFVLAIGMAIDANVLVFERAREEYQQAPGRGLRRALDR
GFKHAWSAIADSNVTTLIAAGLLFWLASGPVKGFGVTLAVGVLASLVSAMLITRVLTQAV
MGRVGPRLSGLGSAGSVRTWLTRRNPRLMRRPKLWLAVAGGLAVVAAAGLVTRGLNFGVE
FTGGRLVEFATSRPVSAEAAGEAVARAGFPTAVVQAGDDGVSVRAARLGLDEVARIEQAL
EAEAGEVTKRSEEFIGPSLGEELRRNALVALGVAVALQLLYLAIRFRWTFGAATVLALLV
DVVVVAGMFAWLGKPIDGVFLAAMLTIVGYSVNDKVVVFDRVRELWAARRGEPLAAAVNG
AILQTMPRTVNTGLGALFILLALMAFGGDSLRDFAIALVAGIVTGTLSSAFVAGPAAIQL
GRFDRRPAPEPAEPRRPVREPRGSGAVV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtgcgccgttctggcgtgcggtgacggcgtgcgccgtcatcgtcatctcctta
atcgtcaccctcgccaccgcgccccgcctggggctggacctgcgcggcggcacccagctc
gtcttcgagtccaagagctcgcccaccgtccaggccgacgccgccgccaccgaccgcgcg
ctggacgtgctgcgccagcgggcggacgcgctcggcgtcgtcgatcccaccctggtccgc
tccggcgagcggcggatcatcgtcgagctgcccggcgtgctcgacccgaggcaggccgcc
gaggtcatcggccgtaccgcgcagctcgccttccattccgtgctcggcgccgccgagccc
ggcgacacgtcggcggtgcgcgacgagaacggcgggctgctcaagctgggccccgccgtc
atcaccggcgacggcgtgcgggacgccgccgagcagagcgacccccagcgcggccccggc
tggtgggtgagcctcgacttccgcgaggaggcgccctggcgcaagctcacggcggacgcg
gcctgccacccgcaggacgacccccggcgccggatcgccatcgccctcgacgggcaggtc
atctcctcgccgccggtggacccctcgatcgcgtgcggggccgggatccccggcggcagc
gcccagatcaccggctcctacacgcacgaggaggcgcgcgacctggccgtgctgatcaag
ggcggcgcgctgccggtcccgctcgacctggtcgagcagcgcacggtcggcccgacgctc
ggcgcggcggccatcgacgccagcgccaaggccgcgatcgccgggctgatcctgaccgcg
gtgttcatcgtggccgtctaccggctggccgggctgctgtctgtgctcgccctgctgtgc
tacggcgtcatctcgtacgcggcgctggtggcgatgggcgcgaccttcacgctgccgggg
ctggccgggttcgtgctggccatcggcatggccatcgacgccaacgtgctggtcttcgag
cgggccagggaggagtaccagcaggcgccgggccggggcctgcgcagggcgctcgaccgg
gggttcaagcacgcctggagcgcgatcgccgactccaacgtcaccaccctgatcgccgcg
ggcctgctgttctggctggcctccgggccggtcaagggcttcggcgtgacgctggccgtc
ggcgtgctggcctcgctcgtctcggccatgctcatcacccgcgtgctcacccaggccgtc
atgggccgggtcgggccgcgcctgtcggggctcggctccgccggctcggtcaggacctgg
ctgacccgtaggaacccgcggctgatgcggcggccgaagctgtggctggccgtcgctggc
gggctggcggtggtcgccgccgccgggctcgtgacgcgcgggctgaacttcggcgtcgag
ttcaccggcggccggctcgtcgagttcgccacctccaggccggtctccgccgaggcggcg
ggggaggcggtcgcgcgggccgggttccccacggcggtggtgcaggcgggcgacgacggc
gtctccgtccgcgccgcgcggctcggcctcgacgaggtcgccaggatcgagcaggccctg
gaggccgaggcgggcgaggtgaccaagcgcagcgaggagttcatcggccccagcctgggc
gaggagctgcgccgcaacgcgctcgtcgcgctcggcgtggccgtggccctgcaactgctc
tacctcgcgatccggttccggtggacgttcggcgccgcgacggtgctggcgctgctggtg
gacgtggtcgtggtggcgggcatgttcgcctggctcggcaagccgatcgacggcgtgttc
ctggccgcgatgctgaccatcgtcggctactcggtgaacgacaaggtggtggtgttcgac
cgggtcagggagctgtgggcggcccggcgcggcgagccgctcgcggcggccgtgaacggc
gcgatcctgcagaccatgccgcgcaccgtgaacaccggcctcggcgcgctgttcatcctg
ctcgcgctcatggccttcggcggcgactcgctgcgggacttcgcgatcgcgctggtcgcc
gggatcgtgaccggcaccctgtcgtccgcgttcgtggccgggcccgcggcgatccagctc
ggccgcttcgaccgccgcccggcccccgaaccggccgagccacgccggcccgtccgcgag
ccgcgcggctcgggagccgtcgtgtga
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