Nonomuraea gerenzanensis: LCN96_39825
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Entry
LCN96_39825 CDS
T07782
Symbol
frdA
Name
(GenBank) fumarate reductase (quinol) flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn00020
Citrate cycle (TCA cycle)
ngn00190
Oxidative phosphorylation
ngn00620
Pyruvate metabolism
ngn00650
Butanoate metabolism
ngn00720
Other carbon fixation pathways
ngn01100
Metabolic pathways
ngn01110
Biosynthesis of secondary metabolites
ngn01120
Microbial metabolism in diverse environments
ngn01200
Carbon metabolism
ngn02020
Two-component system
Module
ngn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ngn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ngn_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LCN96_39825 (frdA)
00620 Pyruvate metabolism
LCN96_39825 (frdA)
00650 Butanoate metabolism
LCN96_39825 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LCN96_39825 (frdA)
00720 Other carbon fixation pathways
LCN96_39825 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LCN96_39825 (frdA)
Enzymes [BR:
ngn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LCN96_39825 (frdA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UBU10447
LinkDB
All DBs
Position
complement(8555069..8556814)
Genome browser
AA seq
581 aa
AA seq
DB search
MIDVLIVGGGGAGLRAAVAVAETDPSLKVAVVSKVYPMRSHTVSAEGGAAAVIGIGDTLD
EHCYDTISGGDWLCDQDAVEAFVAEAPRELIQLEHWGCPWSRESDGRVAVRPFGGMKKMR
TWYAADKTGFHLLHTLFQTTLKYQDIIRYDEWFVTKLVVDDGRVHGVVAVEIRTGRIETI
PARTVILATGGCGKVFPFTTNAAIKTGDGMALAYREGAPLKDMEFVQYHPTGLPFTGILI
TEAARAEGGWLINKDGYRYLQDYDLGKPTPTPKLRSMELGPRDRLSQAFVHEQHKGRTVD
TPYGPVVYLDLRHLGEGKIDARIPFVRELCRSYQNLDPATDLIPVRPVVHYMMGGVHTDL
DGATPIAGLYAAGETACVSINGANRLGSNSLPEILVFGRRAGLAAAGFAKEHRDAEPPAV
RSQGGDERRRLERVREGSRHGDGRGERIADLREQMQHTLEGAAGIYRTGDELAKAVDTLA
DLRERAKEACVEDGSTAFNTELISLQELHCMLEIAQTIVACALNRRESRGAHQRTDFSAR
DDAAFLAHSLVHRAPDGTPSVGLLPVTITRWPPGERVYGRD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtgctcatcgtcgggggaggcggggccgggctgcgcgcggccgtcgcggtc
gccgagacggatccttcgctgaaggtggcggtcgtgtcgaaggtctatccgatgcgcagc
cacaccgtctccgccgagggcggcgccgccgcggtgatcggcatcggcgacacgctcgat
gagcactgctacgacacgatctccggcggcgactggctctgcgaccaggacgccgtggag
gcgttcgtggccgaggcgcccagagagctgatccagctcgaacactggggctgcccgtgg
agcagggagagcgacggccgggtggcggtgcggccgttcggcggcatgaagaagatgcgc
acctggtacgcggccgacaagaccggcttccacctgctgcacacgctcttccagaccact
ctgaaatatcaggacatcatcaggtacgacgagtggttcgtcaccaagctcgtcgtggac
gacgggcgcgtccacggcgtcgtggccgtggagatcaggaccggccgcatcgagaccatc
ccggccaggaccgtcatcctggccaccggcggctgcggcaaggtcttccccttcaccacc
aacgccgccatcaagaccggcgacggcatggccctggcctaccgcgagggcgcgccgctg
aaggacatggagttcgtccagtaccaccccaccggcctgccgttcaccggcatcctcatc
accgaggcggccagggcggagggcggctggctgatcaacaaggacggctaccgctacctc
caggactacgacctgggcaagcccacccccaccccgaagctgcgcagcatggagctgggg
ccgcgcgaccggctgtcgcaggcgttcgtgcacgagcagcacaagggccgcacggtggac
accccgtacgggcccgtcgtctacctggacctgcgccacctcggcgagggcaagatcgac
gcccgcatcccgttcgtccgcgagctgtgccgcagctaccagaacctggacccggccacc
gacctcatcccggtacgcccggtcgtgcactacatgatgggcggcgtgcacaccgacctc
gacggcgccaccccgatcgcgggcctgtacgcggcaggggagacggcctgcgtgagcatc
aacggcgccaaccggctcggctccaactcactgcccgagatcctcgtcttcggccgccgg
gcgggcctggcggcggccgggttcgccaaggagcaccgcgacgccgagccgcccgccgta
cgcagccagggcggcgacgagcggcggcggttggagcgcgtgcgcgagggcagcaggcac
ggcgacggacgaggcgagcggatcgccgacctgcgcgagcagatgcagcacacgctcgaa
ggcgcggccggcatctaccgcaccggcgacgagctggccaaggccgtggacacgctcgcg
gacctgcgcgagcgggcgaaggaggcgtgcgtcgaggacggcagcaccgccttcaacacc
gagctgatcagcctgcaggagctgcactgcatgctggagatcgcgcagacgatcgtggcc
tgcgcgctgaacaggcgggagtcgcgcggcgcgcaccagcgcaccgacttctcggccagg
gacgacgcggccttcctggcgcactcgctggtgcaccgcgcgcccgacggcacgccgtcg
gtcggcctgctgcccgtgacgatcacccgctggcctccgggagaaagggtctatggccgt
gactga
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