Nonomuraea gerenzanensis: LCN96_41170
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Entry
LCN96_41170 CDS
T07782
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngn03016
]
LCN96_41170
Enzymes [BR:
ngn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LCN96_41170
Transfer RNA biogenesis [BR:
ngn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LCN96_41170
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UBU10695
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All DBs
Position
8851593..8852819
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AA seq
408 aa
AA seq
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MTEERTVEPLLEPRDGIPAVVADAAGLAEVVARFAAGSGPVAVDAERASGYRYGNRAYLV
QLRRAGAGTALIDPIGCPDLSALDQAVADAEIVLHAASQDLPCLMEVGFKPRVMFDTELA
GRLLGYERVGLGTMVETVLGLRLEKGHSAADWSTRPLPEDWLRYAALDVEVLVELRDVLH
QELAESGKLAWAREEFAAVLGTPPPAPRSDPWRRTSGIHKVRNVRALAIVRELWTMRDRI
AREADLAPGRVLPDAAIVTAALEGPRTKKALTEISAFTGRSARRHMSDWLAAVARARNLP
DNQLPQPSTPGDGPPPPNRWADRDPAAAKRLAAARAVVAALAEEHHMPTENLLQPDAVRR
LTWEPPAEVTEESVTARLRELGAREWQLSLTAAPIAKALSRLGARGAP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaacgcacagtggagccgctgctggagccgcgcgacggcatacccgctgtc
gtcgccgacgccgccgggctggcggaggtggtggcgcggttcgccgccggcagcggcccc
gtcgcggtggacgccgagcgtgcctccggctaccgctacggcaaccgcgcctacctcgtg
cagctgcgccgggccggggccggcaccgcgctgatcgacccgatcgggtgccccgacctg
tccgcgctcgaccaggccgtggccgatgcggagatcgtgctgcacgccgcctcccaggac
ctgccgtgcctgatggaggtggggttcaagccgcgcgtgatgttcgacaccgagctggcc
gggcggttgctcggctacgagcgggtcgggctgggcacgatggtcgagaccgtgctcggc
ctgcggctggagaagggccactcggcggccgactggtccaccaggccgctgcctgaagac
tggctgcgctacgccgcgctcgacgtggaggtgctggtcgagctgcgcgacgtgctgcac
caggagctggcggagtcgggcaagctggcgtgggctcgcgaggagttcgccgccgtgctc
ggcaccccgccgcccgcgccgcgctccgacccgtggcggcgcacgtcgggcatccacaag
gtacgcaacgtgcgcgcgctggcgatcgtgcgcgagctgtggaccatgcgcgaccgcatc
gcccgtgaggccgatctcgcccctggccgggtgctgccggacgcggcgatcgtcaccgcc
gcgctggaagggccgcgcaccaagaaggccttgaccgaaatttcggcattcaccgggcga
agtgcgcgccggcacatgagcgactggctcgccgccgtggccagggcccgcaacctgccc
gacaaccagctcccccagcccagcacccccggcgacggcccgccgccgcccaaccgctgg
gccgaccgcgaccccgccgccgccaagcggctggccgcggcccgtgccgtggtcgccgcc
ctggccgaggagcaccacatgcccacggagaacctgctgcagcccgacgccgtacgcagg
ctcacctgggagccgcccgccgaggtcaccgaggagagcgtgacggccaggctgcgcgag
ctgggcgcccgcgagtggcagctctcgctcacggccgcgcccatcgccaaggccctgtcc
aggctgggggcacgcggcgcgccgtaa
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