Nonomuraea gerenzanensis: LCN96_41830
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Entry
LCN96_41830 CDS
T07782
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn00061
Fatty acid biosynthesis
ngn00071
Fatty acid degradation
ngn01100
Metabolic pathways
ngn01212
Fatty acid metabolism
ngn02024
Quorum sensing
ngn04146
Peroxisome
Module
ngn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LCN96_41830
00071 Fatty acid degradation
LCN96_41830
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LCN96_41830
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCN96_41830
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ngn01004
]
LCN96_41830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngn04147
]
LCN96_41830
Enzymes [BR:
ngn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LCN96_41830
Lipid biosynthesis proteins [BR:
ngn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LCN96_41830
Exosome [BR:
ngn04147
]
Exosomal proteins
Exosomal proteins of breast milk
LCN96_41830
Exosomal proteins of breast cancer cells
LCN96_41830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
SusD-like
Motif
Other DBs
NCBI-ProteinID:
UBU10816
LinkDB
All DBs
Position
complement(8999460..9000962)
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AA seq
500 aa
AA seq
DB search
MDVSRLPGFYAIAAADPGRLAVIDTDDTRVTYGDLLARVNQVSHGLRARGLGTGDVVAGV
LPNGVDALIMVMATGQIGLYYVPINWHLTESEIAYILGDCDAKVVVTEPGQAVPGAETGT
AGLAEGQPTDAPADRTSGAVMWYTSGTTGFPKGVQRKLPGAEPEAIVALYMWFFGEVVDL
RPGDGVHLVTSPMYHSAPCAHAQFALHLGHTVVITPRFDPVNILELIERHRVSNAMMVPT
MFHRMLQLPADVRAKYDVSSLRQVIHTAAACPVSVKQQIMDWWGPVLYEYYGSTESTIAF
SVKPHDWLARPGTVGRPAPTFEAKILDDAGEELPPGEPGMIYVKTSMGSFEYRKDPAKTA
ASKRGEWYAPGDIGYLDEDGYLFLCDRRTDLIVSGGVNIYPAEIEAALLEHPAVADVAVI
GVPDEEWGHNVVALVQPAEGIEAGPELTAELMEHCGPRIARFKHPKVIEYREVLPRTPTG
KLSRSKVRADYLAGNTSSSL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcagccggctaccgggtttctacgccatcgccgccgccgaccccggccgcctc
gcggtgatcgacaccgacgacacccgtgtcacctacggcgacctgctcgcccgcgtcaac
caggtgtcccacgggctgcgcgcccgcgggctcggcaccggcgacgtggtggcgggcgtg
ctgcccaacggcgtggacgcgctgatcatggtcatggcgaccgggcagatcggcctgtac
tacgtcccgatcaactggcatctcaccgagtcggagatcgcgtacatcctgggcgactgc
gacgccaaggtcgtcgtcaccgagcccggccaggccgtgcccggcgcggagaccggcacg
gccgggctggccgaggggcagccgacggacgcgcccgccgaccggacctccggggccgtc
atgtggtacacctccggcaccaccggcttccccaaaggcgtgcagcgcaagctgccgggt
gccgagcccgaggccatcgtcgccctgtacatgtggttcttcggcgaggtggtggacctg
cggccgggcgacggggtgcacctggtgacctcgccgatgtaccactccgcgccctgcgcg
cacgcccagttcgcgctgcacctggggcacaccgtggtgatcacgccgcggttcgacccg
gtgaacatcctggagctcatcgagcggcaccgggtgtcgaacgcgatgatggtgccgacc
atgttccaccggatgctgcagctcccggcggacgtccgggccaagtacgacgtgtcgagc
ctgcgccaggtcatccacaccgccgccgcctgccccgtctcggtcaagcagcagatcatg
gactggtgggggccggtgctgtacgagtactacggctcgaccgagtccacgatcgccttc
tccgtcaaaccgcacgactggctggccaggccgggcaccgtgggccggcccgcgcccacg
ttcgaggccaagatcctcgacgacgccggcgaggagctgccgccgggcgagcccggcatg
atctacgtcaagaccagcatgggctccttcgagtaccgcaaggacccggcgaagacggcc
gccagcaagcgaggggagtggtacgcccccggcgacatcggctacctcgacgaggacggc
tacctgttcctgtgtgaccgccgcaccgacctgatcgtctccggcggggtgaacatctac
cccgccgagatcgaggccgcgctcctggagcaccccgcggtggccgacgtggccgtcatc
ggggtgcccgacgaggagtgggggcacaacgtggtcgccctcgtgcagccggccgagggc
atcgaggcgggccccgagctgacggccgagctgatggagcactgcgggccgcgcatcgcc
aggttcaagcacccgaaggtgatcgagtaccgcgaggtgctcccgcgtacccccaccggc
aagctgtcgcgctcgaaggtgcgcgccgactacctcgccgggaacaccagctcctcgctg
taa
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