Nonomuraea gerenzanensis: LCN96_42415
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Entry
LCN96_42415 CDS
T07782
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngn03032
]
LCN96_42415
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_42415
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LCN96_42415
DNA replication proteins [BR:
ngn03032
]
Prokaryotic type
DNA Topoisomerases
LCN96_42415
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCN96_42415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HALZ
Motif
Other DBs
NCBI-ProteinID:
UBU10926
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All DBs
Position
9134856..9137348
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AA seq
830 aa
AA seq
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MARRTTAPPPEDFEERIVDIDVSAEMRASYLEYAYSVIYQRALPDARDGLKPVQRRILYS
MSEMGLRPDRGHVKSSRVVGDVMGKLHPHGDSAIYDALVRLAQPFSMRLPLVDGHGNFGS
PDDLPAAMRYTEARLAPAAMLMVESLDEDTVDFKPNYDGQETEPTVMPSAFPNLLVNGTS
GIAVGMATNMAPHNLVEVVAAARHLIKKPDATLDDLMRFVPGPDLPTGGSIIGLQGVRDA
YETGRGTFRMRAKCTVEQITPRRKGIIVTELPYNVGPERVVTKIKELVTSKKLQGIADLK
DLTDRHKGLRLVIEIKNGFIPEAVLEELYRLTPMEETFGINNVALVDGEPRTLGLREMLQ
VYVDHRLEVVRRRSEFRRRKREERLHLVDGLIVALLNIDEVIQVIRSSDDSAQARTRLMD
VFDLTDIQAAYILDTPLRRLTRYDKLELDREKETLSEEIAQLTEILSSEAKLRQVVSGEL
ADVAKKYGTPRRTVLLEAPGVTRTPVVDLQVADDPCLAMLSSTGLLARTSEAAPLPAEGE
RAAHDVLLSVVRTSVRGEVGVITSLGRLIRVQVVDLPTLPPSANPPSLSGGHPVSEYVSL
QPDEKVVGLGSLDPDGPGLALGTAQGVVKRVVPDYPANRDDFEVITLKDGDTVVGAVELE
SESHDLVFISSDAQLLRYSASLVRPQGRPAGGMAGIRLDDGSRVIWFGVVDPERPAQVVT
VAGSSTALPGTQVGGGKVSDYAEFPAKGRATGGVRAQRFLKGEDELLLAWAGPAPAKAVS
AVGKPVPLPEEVGRRDGSGVRLTHTIGAVGGALGSGPEPARGDSAPSTDE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcccgacgcacgactgcacccccgcctgaggacttcgaggagcggatcgtcgacatc
gacgtctccgccgagatgcgcgcgagctacctcgagtacgcgtactcagtgatctatcag
cgcgccctgcccgatgcgcgcgacggcctcaagcccgtgcagcggcgcatcctgtactcg
atgagcgagatgggcctgcgccccgaccgcggccacgtcaagtcgtcccgagtggtcggt
gacgtcatgggcaagctgcacccgcacggcgacagcgccatctacgacgcgctggtccgc
ctggcgcagccgttctcgatgcggctgccgctggtcgacggccacggcaacttcggctcg
cccgacgacctgcccgccgccatgcgttacaccgaggccaggctggccccggcggccatg
ctcatggtcgagtcgctcgacgaggacaccgtcgacttcaagcccaactacgacggccag
gagaccgagcccacggtcatgccgtcggcgttccccaacctcctggtcaacggcaccagc
ggcatcgcggtgggcatggccaccaacatggcgccgcacaacctcgtcgaggtcgtggcc
gccgcccgccacctcatcaagaagcccgacgcgacgctcgacgacctgatgcggttcgtg
cccgggcccgacctgccgaccggcggctcgatcatcgggctgcagggcgtgcgcgacgcg
tacgagacgggccgcggcaccttccgcatgcgggccaagtgcacggtcgagcagatcacg
ccgcggcgcaagggcatcatcgtcaccgagctgccctacaacgtcggccccgagcgcgtg
gtcaccaagatcaaggagctggtgaccagcaagaagctccagggcatcgccgacctgaag
gacctcaccgaccggcacaagggcctgcggctggtcatcgagatcaagaacggcttcatc
cccgaggccgtgctggaggagctctaccggctgacgccgatggaggagaccttcggcatc
aacaacgtcgccctggtcgacggcgagccgcgcaccctcgggctgcgcgagatgctgcag
gtctacgtcgaccaccgcctggaggtcgtgcgccgcaggtcggagttcaggcggcgcaag
cgcgaggagcgcctgcacctggtcgacggcctgatcgtcgcgctgctcaacatcgacgag
gtcatccaggtcatccgttcctccgacgactcggcgcaggcgcgcacccgcctgatggac
gtcttcgacctgaccgacatccaggccgcctacatcctcgacacgccgctgcgccgcctg
acccgctacgacaagctggagctcgaccgcgagaaggagacgctgagcgaggagatcgcc
cagctcaccgagatcctctcctccgaggccaagctgcgccaggtggtctcgggcgagctg
gccgacgtggccaagaagtacggcacgccgcgccgcacggtgctgctggaggcgcccggc
gtcacccgcacgcccgtggtcgacctgcaggtggccgacgacccgtgcctggccatgctc
tcctccaccggcctgctggcccgcacctccgaggccgcgccgctgcccgccgagggcgag
cgcgccgcacacgacgtgctgctcagcgtcgtacggacctccgtgcgcggcgaggtcggc
gtgatcacctcgctgggccggctgatccgcgtccaggtcgtcgatctgcccaccctgcca
ccctcggccaacccgccgtcgctgtcgggcggccacccggtgtcggagtacgtgtcgctg
cagcccgacgagaaggtggtcggcctcggctccctcgaccccgacggccccggcctggcg
ctgggcacggcgcagggcgtggtcaagcgggtggtgcccgactacccggccaaccgcgac
gacttcgaagtgatcaccttgaaggacggcgacaccgtggtgggcgcggtcgagctggag
tcggagtcccacgatctggtgttcatctcctccgacgcgcagctgctgcgttactccgcc
tcgctcgtccggccccaggggcgcccggcgggcggcatggcgggcatccggctcgacgac
ggctcccgggtgatctggttcggcgtggtcgatcccgagcgtccggcgcaggtggtcacc
gtcgccggctcctccacggcgctgcccggcacgcaggtgggcggcggcaaggtttccgac
tacgccgagttccccgccaaggggcgggcgaccggcggggtgcgggcgcagcgcttcctg
aagggcgaggacgagctgctgctggcctgggccggtccggcgcccgccaaggcggtctcg
gcggtgggcaagccggtgccgctgcccgaggaggtcggccgcagggacgggtcgggcgtg
cggctcacgcacacgatcggcgccgtcggcggcgccctcggctccggccccgaaccggcg
cggggcgactctgctccttcgacggacgagtga
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