KEGG   Nonomuraea gerenzanensis: LCN96_42480
Entry
LCN96_42480       CDS       T07782                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ngn  Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:ngn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LCN96_42480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngn03021]
    LCN96_42480
Transcription machinery [BR:ngn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LCN96_42480
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 HTH_20 BUD22 Cwf_Cwc_15
Other DBs
NCBI-ProteinID: UBU19043
LinkDB
Position
complement(9150736..9152388)
AA seq 550 aa
MSPASSTRSKPQELNEPVIQRLLERGRSQGFLESEDVRQAFEEADIPMSHAAAFLRNLSK
EGVTVVVTAADSAAPKKSRGPAKRRTAAPVKTKTAAAAKEQQPETVTAVVGTAEAEPAAK
KAAPAKKAAPAAKKAAAPAAAKKAEQKNAGPAETKPKAPEAPRGETDDDEDIELDGDVEL
EDLEDIDVDEIVAEDDADSEGDSDDDDSDEEPKAADVAAVQKTEEEVLILSDDDDDAPVA
QVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEEQLGGGETDGLPVDVK
AELEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYT
KGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEE
LARELDMTPEKVVEVQKYGREPISLHTPLGEEGDSEFGDLIEDSEAIVPADAVSFTLLQE
QLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPS
RSQVLRDYLD
NT seq 1653 nt   +upstreamnt  +downstreamnt
gtgtcgcctgcaagttcgactcgctcgaagccacaagagctgaacgagcccgtcattcag
cgactgctcgagcgtgggcgctcgcagggtttcctcgagtctgaggatgtccgtcaggcc
ttcgaggaggcggacatccccatgtcgcacgccgccgcgttcttgcggaacctcagcaaa
gagggcgtgaccgtggtggtgaccgccgcggattcggctgcgccgaagaagtctcgtggt
ccagcaaagcgccgcaccgccgcccccgtcaagaccaagacggcggcggccgccaaagag
cagcagcccgagaccgtgaccgcggtcgtgggcaccgctgaagccgagccggccgccaag
aaggcggcccctgccaagaaggccgccccggcggcgaagaaggccgcggcacccgccgcc
gccaagaaggccgagcagaagaacgctgggcctgccgagaccaagccgaaggcgcccgag
gccccgcggggcgagacggacgacgacgaggacatcgagctcgacggcgacgtggagctg
gaggacctcgaggacatcgacgtcgacgagatcgtcgcggaagacgacgccgactccgag
ggcgactccgacgacgacgactccgacgaggagcccaaggccgccgacgtcgccgccgtg
cagaagaccgaggaagaggtcctcatcctctccgacgacgacgatgacgctccggtggcc
caggtggccgccgccggcgccaccgccgacccggtgaaggactacctcaagcagatcggc
aaggtccccctgctcaacgccgagcaggaggtcgagctggccaagcgcatcgaggcgggc
ctgttcgccgaggagcagctgggcggcggcgagaccgacgggctgccggtcgacgtcaag
gccgagctggagtggatcgccgaggacggccgccgcgccaagaaccacctgctggaggcc
aacctccggctcgtggtctcgctggccaagcgctacaccggccgcggcatgctcttcctc
gacctgatccaggaaggcaacctcggcctgatcagggccgtggagaagttcgactacacc
aagggctacaagttctccacctacgccacgtggtggatccggcaggcgatcacgcgtgcc
atggccgaccaggcgcggaccatccgcatcccggtccacatggtcgaagtgatcaacaag
ctggcccgagtccagcggcagatgctgcaggacctcggccgcgagcccacgccggaagag
ctggcccgcgagctggacatgacgcccgagaaggtcgtcgaggtccagaagtacggccgc
gagcccatctccctgcacaccccgctgggtgaggagggcgacagcgagttcggtgacctc
atcgaggactccgaggccatcgtgccggccgacgccgtcagcttcacgctgctgcaggag
cagctgcactccgttctcgacacgctgtcggaacgcgaggcgggcgtcgtgtcgatgcgg
ttcggcctcaccgacggtcagccgaagacgctggacgagatcggcaaggtttacggggtc
acccgtgagcgcatccgccagatcgagtcgaagaccatgtccaagctgcgccacccgtcc
cggtcccaggtcctgcgcgactacctggactga

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