Nonomuraea gerenzanensis: LCN96_47070
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Entry
LCN96_47070 CDS
T07782
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngn03032
]
LCN96_47070
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_47070
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LCN96_47070
DNA replication proteins [BR:
ngn03032
]
Prokaryotic type
DNA Topoisomerases
LCN96_47070
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCN96_47070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UBU11792
LinkDB
All DBs
Position
complement(10116751..10117776)
Genome browser
AA seq
341 aa
AA seq
DB search
MPERDQRGDELHPSDQSEPGIVRRRRGRGFSYEGPDGRPVRDPATLARIKALAIPPAWRD
VWICMSPRGHLQAVGTDSAGRRQYRYHDEWREQQDRAKFDRVLEVAERLPAFRKTVDDQL
QGRGLTRQRVLAAAARLLDIGFFRIGGESYDTYGLATLRMEHVTCSGGVVTCSYPAKGDV
AREVEVADPAACKVLRSLKALGADGELLRYRHQGGWSDIRSEDINEYLRETIGYEVTAKD
FRTWHATVLAAVGLAVSRPAREAPSSKQRAVTRVMREVSEYLGNTPTVARASYVDPRVVE
AYDQDRTIAGALTELGADADFGQLATAGPVERAVIELIRAV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcgagatcaacgcggcgacgagctgcatcccagtgaccagagcgagccgggc
atcgtgcggcggcggcgcgggcgcgggttcagctacgagggccccgacggccgcccggtg
cgcgacccggccacgctcgcccggatcaaggcgctggccatcccacctgcctggcgggac
gtgtggatctgcatgtcgcccagggggcatctccaggccgtcggcacggactccgcgggc
cggcggcagtaccgctaccacgacgagtggcgggagcagcaggaccgggccaagttcgac
cgggtgctggaggtggccgagcggctgccggcgttcaggaagaccgtggacgaccagctc
caggggcgcgggctgaccaggcagcgggtgctggccgccgccgcccggctgctcgacatc
ggcttcttccgcatcggcggcgagagctacgacacctacggtctggccacgctgaggatg
gagcacgtcacctgctcgggcggtgtggtgacctgttcctacccggccaagggcgacgtg
gcgcgggaggtcgaggtggccgatccggccgcgtgcaaggtgctgcgctcgctcaaggcc
ctgggcgcggacggcgagctgctgcgctaccggcaccagggcggctggagcgacatcagg
agcgaggacatcaacgagtacctgcgcgagaccatcggctacgaggtcacggccaaggac
ttccgcacctggcacgccaccgtcctggcggcggtggggctggcggtgtccaggccggcg
cgcgaggcccccagcagcaagcagcgcgccgtcacccgggtgatgcgggaggtctccgag
tacctgggcaacaccccgacggtggcgcgggcgtcgtacgtggacccgcgcgtggtggag
gcctacgaccaggacaggacgatcgcaggggcgctgaccgaactgggggcggacgcggat
ttcggccagctcgcgacggcgggcccggtcgaacgggcggtcattgagctgattcgtgcc
gtttga
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