Nonomuraea gerenzanensis: LCN96_47650
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Entry
LCN96_47650 CDS
T07782
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngn03032
]
LCN96_47650
03036 Chromosome and associated proteins [BR:
ngn03036
]
LCN96_47650
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_47650
DNA replication proteins [BR:
ngn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LCN96_47650
Chromosome and associated proteins [BR:
ngn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LCN96_47650
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LCN96_47650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
UBU11898
LinkDB
All DBs
Position
complement(10244224..10244523)
Genome browser
AA seq
99 aa
AA seq
DB search
MNKRELVEAIADRVGDRKTATEAVNAVIDAIQKAVASGDKVSITGFGAFEMVNKPARTAR
NPSTGAEINVAESWAPKFRPGSDFKDLVNEGGKKIGKRK
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgagaactcgtcgaggccatcgctgatcgggtgggcgacaggaagacggcc
acggaggccgtcaacgcggtcatcgacgccatccagaaagccgtggccagcggcgacaag
gtctcgatcacgggcttcggcgcgttcgagatggtgaacaagcccgctcgtacggcgcgt
aatccgtcgaccggcgcggaaatcaacgtcgcggagagctgggcgccgaagttccgtccc
gggtccgatttcaaagacctcgtgaacgagggcggcaagaagatcggcaaaaggaagtaa
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