Nonomuraea gerenzanensis: LCN96_49120
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Entry
LCN96_49120 CDS
T07782
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03420
Nucleotide excision repair
ngn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCN96_49120
03430 Mismatch repair
LCN96_49120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_49120
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCN96_49120
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCN96_49120
MMR (mismatch excision repair)
Other MMR factors
LCN96_49120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF1612
C1_1
DUF3624
Motif
Other DBs
NCBI-ProteinID:
UBU12175
LinkDB
All DBs
Position
complement(10555404..10557452)
Genome browser
AA seq
682 aa
AA seq
DB search
MNDADDVLIGLDPEQRAVAEAVRGPVCVLAGAGTGKTRAITHRIAYAVRSGVVDAQSVLA
VTFTTRAAGELRQRLRALGAPGVQARTFHAAALRQLTFFWPRVIGGAAPSVIESKLPVLG
EACRSLRLTPERSELRDLASEVEWAKVTQIAPEDYVAAAAKYHRTPPMPAEQVSRVYEAY
ERIRRERHLVDFETILELTAAVMTEHQEVAAQIRQQYRYFVVDEYQDVNPLQKLLLDTWL
GGRDDLCVVGDPNQTIYSFTGASPRYLTGFGVEHPDAAVIKLVRDYRSTPQVVDLANLVI
AKGRSPHRLELVAQRPDGPKPAFTEYDDEPAEAAGVARSIRKLLDKGVPSREIAVLFRVN
SQSEAYEEALTKAEIPYVLRGAERFFERPEVRQAVVLLRGAARSAAGEPLASEVHHILGG
IGLTPAPPGGGKAREKWESLKALADLAEDMAAEGADLPAFVTELERRASEQHAPPVEGVT
LASLHAAKGLEWDAVFLVGVTDGMLPIIYAESPEQIEEERRLLYVGVTRAREHLSLSWAL
ARAPGGRKSRRPSRFLDGLTGRASAPPRLAPSPSRERRQVATPVSCRVCAKTLVNATEQK
LGRCSTCPADYDEALLERLKAWRTATAKEAKLPPYVVFTDVTLQAIAERAPVTEQELLSI
AGVGRVKLDRYGEAVLGLCRGS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgcggacgacgtactgatcggactcgaccccgagcagcgcgctgtcgccgag
gccgtgcgcgggccggtgtgcgtgctggccggcgcggggacgggcaagaccagggcgatc
acgcaccgcatcgcgtacgcggtgcgcagcggggtggtcgacgcgcagagcgtgctcgct
gtgacgttcaccacgcgcgcggcgggtgagctgcgccagcgcctgcgcgcgctcggcgcg
cccggcgtgcaggcccgcaccttccacgccgcggcgctgcgccagctcacgttcttctgg
ccgcgggtgatcggcggcgcggccccgtcggtcatcgagtccaagctgcccgtcctgggc
gaggcgtgccgcagcctgcggctcacccccgagcgctccgagctgcgcgacctcgcctcc
gaggtcgaatgggccaaggtcacgcagatcgcccccgaggactacgtggccgccgccgcc
aagtaccaccgcacgccgccgatgccggccgagcaggtgagccgcgtctacgaggcgtac
gagcggatcaggcgtgagcgccacctggtcgacttcgagaccatcctggagctgaccgcg
gccgtgatgaccgagcaccaggaggtggcggcgcagatccgccagcagtaccgctacttc
gtggtggacgagtaccaggacgtcaacccgctgcagaagctgctgctcgacacctggctc
ggcgggcgcgacgacctctgcgtggtcggcgaccccaatcagacgatctactccttcacc
ggcgccagcccgcgctacctgaccgggttcggggtcgagcatcccgacgcggccgtcatc
aagctggtccgcgactaccgctccaccccccaggtcgtcgacctggccaacctggtgatc
gccaagggccgctccccacaccgcctggagctggtcgcccagcggcccgacgggcccaag
ccggccttcaccgagtacgacgacgagcccgccgaggccgccggggtggcccggagcatc
aggaagctcctcgacaagggggtgccgtcgcgcgagatcgccgtgctgttccgggtcaac
tcccagtcggaggcgtacgaagaggccctgaccaaggcggagatcccgtacgtgctgcgc
ggcgccgagcgtttcttcgagcggccggaggtgcgccaggcggtcgtcctgctgcgcggc
gcggcccgctccgccgcgggcgagccgctggcctccgaggtgcaccacatcctgggcggc
atcggcctgaccccggccccgcccggcggcggcaaggccagggagaagtgggagtcgctc
aaggcgctggccgacctggccgaggacatggcggccgagggggccgacctgcccgcgttc
gtgaccgagctggagcgccgcgcctccgagcagcacgcgccgcccgtcgagggcgtcacg
ctggcctcgctgcacgccgccaagggcctggagtgggacgccgtcttcctcgtcggcgtc
accgacggcatgctgccgatcatctacgccgagagccccgagcagatcgaggaggagcgc
cgcctgctctacgtcggcgtcacccgcgccagggagcacctgtcgctctcctgggccctg
gcccgcgcgccggggggccgcaagagccgccgcccgtcccgcttcctcgacggactcacc
ggccgcgcctccgcgccgccccgcctggcgccgtccccctcgcgggagcgccgccaggtg
gccacgccggtgagctgccgcgtgtgcgccaagacgctggtcaacgccaccgagcagaag
ctgggccgctgctccacctgccccgccgactacgacgaggcgctgctcgaacggctgaag
gcgtggcgcacggccacggccaaggaggccaagctgccgccgtacgtcgtcttcaccgac
gtgacgctgcaggccatcgccgagcgcgcgccggtcaccgagcaggagctgctgtcgatc
gcgggcgtcggcagggtcaagctcgaccggtacggcgaagccgtgctgggcttgtgccga
gggtcgtaa
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