Nonomuraea gerenzanensis: LCN96_49160
Help
Entry
LCN96_49160 CDS
T07782
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03420
Nucleotide excision repair
ngn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCN96_49160
03430 Mismatch repair
LCN96_49160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_49160
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCN96_49160
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCN96_49160
MMR (mismatch excision repair)
Other MMR factors
LCN96_49160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UBU12183
LinkDB
All DBs
Position
complement(10565234..10568515)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLTPAELAGKLGILPPTPEQATVIEAPLEPMVVMAGAGSGKSETMAGRVVWLVANGLVKP
ENVLGLTFTRKAAAELATRVRERLNGLAEAGLVEPGALDNEPTVSTYHAYAARLVTDHAL
REGLEPTMRLVRPAVSWQLASRVVAMYDGPMDRIELGPPSVTAALLELAGELSEHLRSPA
DVRGVGEWLAARHAVLPGRTTLAQRKPLSVHAAREQLLPLVERYERLKRAREVIDYGDQM
SLAARIAANHKEVGEIERGRYSVVLLDEYQDTSHAQLVLLRSLYGGGHPVTAVGDPCQSI
YGWRGASAGNLRRFPKDFRTATGDQAPVRQLSVSFRNGDRVLDVAARVQLPLRMEAREVP
VLVPGPNRIERGRVTCAFHETAEDEAKWIADGVARLLGQETAPDGLPWGEKERKKTLALQ
PQDVAILARKRSQFPALRRALEERDIPVEVVGLGGLLTVPEVSDIVATLRVLYDPTAGDA
LARLLAGPRWRIGPADLRVLGEQARTLARELSESHREDDPLDQVVADLAEERGSLVDALD
ELPDREEWLEPYSPLARTRLVALAQELRHLRAHTAQPLPDLISEVERRLGLDIEVAARSG
TVGAFAARADLDAFLDAASRFAGDAEDPTLGAFLAYLQAAESEEFGLEAGRVGESNSVKL
MTVHASKGLEWPVVVVPGLSQLVSTKGTIATGSIFPATPVMNSRWTENPRKLPYALRGDA
ADLPRLGGLSKEELAAFDEHCRERDLMEERRLAYVAVTRAHYHLIASGYRWGSATKPLEP
SDFLLEIRDTADRISFWADDLAEGATNPLLAEPAEATWPVEPEGLRYESVLDGARLVEDA
LAGTLGPYEDEPIKAFEEERLRAWQRDTDLLLRERELHRRKPATTVELPAKLTVSALVTL
AADPRELARRIRRPVPKKPAPLARRGTSFHKWLETRWDQQRLIDDLELYDEELEEADVRL
AELQERFEQSEWADRRPVDLEVPFETMIADRLVRGRMDAVFERDGGGYEVVDWKTGQPPR
GKKAARAASVQLAAYRLAWSHLAQVPLEEVGAAFHYVRANRTVRPVDLLDADGLVALIES
VRLVDGGKPASGA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacccccgccgaactcgccggcaagctcggcatcctcccgcccacccccgagcag
gcgacggtcatcgaggccccgctggagccgatggtcgtcatggcgggcgccggctccggc
aagagcgagaccatggccggccgcgtggtctggctggtcgccaacggcctggtcaagccg
gagaacgtgctgggcctgacgttcacccgcaaggccgccgccgagctggccacccgggtc
agggagcggctcaacggcctggcggaggccgggctggtcgagccgggcgcgctcgacaac
gagcccaccgtgtccacctaccacgcctacgccgcccgcctggtcaccgaccacgcgctg
cgcgaggggctggagccgaccatgcgcctggtcaggcccgccgtgtcgtggcagctcgcc
tcgcgggtggtggcgatgtacgacgggccgatggacaggatcgagctgggcccgccctcg
gtcacggccgccctgctggagctggcaggcgagctctcggagcacctgcgctcgcccgcc
gacgtgcggggcgtgggggagtggctggcggccaggcacgccgtcctgccgggccgcacg
acactggcccagcgcaagccgctgagcgtgcacgcggccagggagcagctcctgcccctg
gtggagcggtacgagcggctcaagcgcgcccgcgaggtcatcgactacggcgaccagatg
tcgctggccgccaggatcgccgccaaccacaaggaggtcggcgagatcgagcggggccgc
tactcggtggtcctgctcgacgagtaccaggacaccagccacgcccagctcgtcctgctg
cgctcgctctacggcggcggccatccggtcaccgccgtgggcgacccgtgccagtccatc
tacggctggcgcggcgcctcggcgggcaacctgcgccgcttccccaaggacttccgcacg
gccaccggcgaccaggccccggtgcgccagctcagcgtcagcttccgcaacggcgaccgc
gtgctcgacgtggccgcccgcgtccagctcccgctgcgcatggaggcccgcgaggtgccc
gtgctggtccccggcccgaaccggatcgagcgcggccgcgtcacctgcgccttccacgag
accgccgaggacgaggccaagtggatcgccgacggcgtcgccaggctcctcggccaggag
acggcccccgacggcctgccctggggcgagaaggagcgcaagaagacgctcgccctgcag
ccccaggacgtcgccatcctggcccgtaagcgctcgcagttccccgcgctgcgcagggcg
ctggaggagcgtgacatcccggtcgaggtggtgggcctgggcggcctgctgaccgtgccc
gaggtgagcgacatcgtggccactctgcgcgtgctgtacgaccccacggcgggcgacgcg
ctggccaggctgctggcgggcccccgctggcggatcggccccgctgacctgcgggtgctc
ggcgagcaggcccgcacgctggcccgcgagctgagcgagagccaccgcgaggacgacccg
ctcgaccaggtggtggccgacctggccgaggagcgcggcagcctggtggacgccctggac
gagctgcccgaccgggaggagtggctggagccgtactcgccgctggcccgcaccaggctg
gtggcgctcgcccaggagctgcgccacctgcgcgcgcacaccgcgcagccgctgcccgac
ctgatcagcgaggtggagcgcaggctcggcctggacatcgaggtggcggcgcgcagcggc
acggtgggggcgttcgcggcgcgggccgacctcgacgcgttcctcgacgctgcgtccagg
ttcgcgggcgacgcggaggacccgacgctgggcgcgttcctggcctaccttcaggcggcg
gagagcgaggagttcggcctggaggcgggccgggtcggcgagagcaacagcgtcaagctg
atgaccgtgcacgcctcgaagggcctggagtggccggtcgtcgtggtgcccggcctgtcg
cagctcgtgagcacgaaggggacgatcgcgacgggcagcatcttccccgccacgccggtg
atgaacagccggtggacggagaacccgcgcaagctcccgtacgcgctgcgtggcgacgcc
gccgacctgccccggctgggcgggctgagcaaggaggagctggcggccttcgacgagcac
tgccgcgagcgggacctgatggaggagcgcaggctcgcgtacgtggccgtgacccgggcc
cactaccacctgatcgcctccggctaccgctggggcagcgccaccaagccgctggagccg
tccgacttcctgctggagatccgcgacaccgccgaccggatctcgttctgggccgacgac
ctcgcggagggcgccacgaacccgctgctggccgagccggccgaggccacctggccggtc
gagcccgaggggctgcgctacgagtccgtgctcgacggcgcccgcctggtcgaggacgcg
ctggcgggcacgctgggcccgtacgaggacgagccgatcaaggcgttcgaggaggagcgc
ctgcgggcctggcagcgcgacaccgacctgctgctgcgcgagcgggagctgcaccggcgc
aagcccgccaccacggtcgagctgccggccaagctgaccgtgtccgcgctggtcacgctg
gccgccgacccgcgcgagctggcccgcaggatccgccgccccgtgccgaagaagcccgcg
ccgctggcccgccggggcacctccttccacaagtggctggagacccgctgggaccagcag
cggctgatcgacgacctggagctgtacgacgaggagctggaagaggccgacgtgcggctg
gcggagctgcaggagcggttcgagcagagcgagtgggccgaccggcggccggtcgacctg
gaggtcccgttcgagaccatgatcgccgaccggctggtgcgtgggcggatggacgccgtc
ttcgagcgggacggcggcggctacgaggtcgtcgactggaagaccgggcagccgccgcgg
ggcaagaaggcagccagggccgcctccgtgcagctcgccgcgtaccggctggcctggtcg
cacctggcgcaggtgccgctggaggaggtcggggcggccttccactacgtccgcgccaac
cgcaccgtgcgcccggtggacctgctcgacgccgacggcctggtggcgctgatcgagagc
gtcaggctcgtagatggtggaaagccggcttcgggtgcatga
DBGET
integrated database retrieval system
