Nonomuraea gerenzanensis: LCN96_51995
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Entry
LCN96_51995 CDS
T07782
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn00040
Pentose and glucuronate interconversions
ngn01100
Metabolic pathways
ngn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LCN96_51995
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCN96_51995
Enzymes [BR:
ngn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LCN96_51995
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Beta_helix
Laminin_G_3
Laminin_G_2
Glyco_hydro_59_C
Motif
Other DBs
NCBI-ProteinID:
UBU12700
LinkDB
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Position
complement(11164304..11165881)
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AA seq
525 aa
AA seq
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MRSKNPLYLACAALGAAVVAALLVIPSASAVTLFSDDFQDGDAAGWSRSGGSWSVVTDGS
PAYRQSGTSADARALAGGGWGDQAVQARVKPIAYNGSGRYVAVLARAQNSSNYYFLGLSN
TGAAILGKRTGGAPITLATGAAGVTPGSWHTVRLEAFGSTLRGFVNNVQVASATDSSFSS
GRVGLAGYYAGATFDDVLVTDLGGPTDPPTTPTIPPGSCRTSGSPVGFASVNAWGQNGTT
GGAGGPTVAVDTTAELLAAIGQPGPLTVCVLGTITLPAGMHNVTSDKTILGVGATSGLTG
GGLNIGLPADDSVTSPPADAVHNVIIRNLSFRGATDDSINVQMFSHHVWIDHNDLADGYD
GLIDIKRGSSYITVSWNHTHDHTKNMLLGHDDGNAAQDVGRLKVTYHNNWFDRTPQRNPR
VRFGEPVHVFNNYYVYNTDTGVACQANAGCLVEGNYFERVEEPVTNSYAGPGGRCVARNN
VFVDESGAPDCSGVVQEASAYYSYTVADPASVKAVVMAGSGVGKL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcagcaagaacccgctctacctcgcctgcgccgcgctcggcgcggccgtcgtcgcg
gcactcctggtcatcccgagcgcgtccgccgtgaccctgttcagcgacgacttccaggac
ggcgacgccgccggctggtcccgctccggcgggagctggtcggtggtcaccgacggctcc
ccggcctaccgccagtccggcaccagcgccgacgcccgcgccctggccggcggcggctgg
ggcgaccaggcggtgcaggcccgcgtcaagccgatcgcctacaacggctcgggccggtac
gtcgcggtgctggccagagcgcagaacagcagcaactactacttcctcggcctgagcaac
accggcgccgccatcctcggcaagcgaaccggcggcgcccccatcacgctcgccaccggc
gcggccggcgtcacccccgggtcgtggcacacggtcaggctggaggcgttcggcagcacg
ctgcgcggcttcgtgaacaacgtgcaggtcgcctcggccaccgacagctcgttcagctcg
ggacgggtcggcctggcgggctactacgccggcgccaccttcgacgacgtcctcgtcacg
gacctcggcggtcccaccgacccgcccaccaccccgaccatcccgccgggcagctgccgc
acctccggctcacccgtcggcttcgcctccgtgaacgcctggggacagaacgggaccacc
ggcggcgccggcggcccgaccgtcgcggtggacacgacggccgagctcctcgccgcgatc
gggcagccggggccgctcaccgtctgcgtcctgggcacgatcacccttccggcgggcatg
cacaacgtcacctcggacaagaccatcctcggcgtcggtgccacctccggcctcaccggc
ggcgggctcaacatcggcctgccggcggacgactccgtgacctcgccaccggccgacgcg
gtgcacaacgtgatcatccgcaacctgtcgttccgcggggccaccgacgactcgatcaat
gtgcagatgtttagccatcacgtgtggatcgatcacaacgatctggccgacgggtacgac
gggctgatcgacatcaagcgcgggtcgtcgtacatcaccgtctcgtggaaccacacgcac
gaccacaccaagaacatgctgctcgggcacgacgacgggaacgccgctcaggacgtgggg
cggttgaaggttacctaccacaacaactggttcgaccggacgccgcagcgcaacccgcgc
gtgcggttcggggagccggtgcacgtgttcaacaactactacgtgtacaacaccgacacc
ggggtggcctgccaggcgaacgcggggtgcctggtggaggggaactacttcgagcgggtg
gaggagcctgtcaccaactcttatgcggggcctggggggcggtgtgtggcgcggaacaac
gtgttcgtggatgagtcgggggcgcctgactgcagtggggtggtgcaggaggcgtccgcg
tactactcgtacaccgtggctgatccggcctcggtgaaggcggtggtcatggcgggctcc
ggcgtgggcaagctctag
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