Neisseria gonorrhoeae FA 1090: NGO_1785
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Entry
NGO_1785 CDS
T00237
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ngo
Neisseria gonorrhoeae FA 1090
Pathway
ngo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGO_1785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngo03019
]
NGO_1785
03009 Ribosome biogenesis [BR:
ngo03009
]
NGO_1785
Enzymes [BR:
ngo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NGO_1785
Messenger RNA biogenesis [BR:
ngo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NGO_1785
Ribosome biogenesis [BR:
ngo03009
]
Prokaryotic type
rRNA processing factors
NGO_1785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AAW90404
UniProt:
Q5F5Y3
LinkDB
All DBs
Position
1754221..1756980
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AA seq
919 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFLGYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAE
FMSYVMPGNAGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHAACPRCAGTGVIRGIESTALHV
LRMVQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRHTSPAPTAA
PEKKTSWWDSFKAWLKRIFGGSETQAVPAAETSEKRSTANRSGSRANNRRQNPRRSKREG
SKIEVREAAGKTAGQKARADKAETRNNGNRRRNERGDRATERANEAEIQSRNVQPAAPVA
DAAPPETEGQTGKRRRNGSRNERGQTAPETAAVAETAVQTAENTPPEPYTAEDKGSKPKS
ERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVF
GETDANAPITVSIADPLIATPVQTASSAVSNGDALIYDAAEKIRRAAADILPEGAAPKAA
AQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKP
SEAATVPAEEMIQVETRQG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttattcaacgcaacgcaggccgaagagctgcgcgttgccatcgtcgac
ggacaaaacctgctggatttggacatcgaaacgctgggcaaagaacagcgcaaaggcaat
atctacaaaggcatcattacccgcatcgagccgtcgctggaagcgtgtttcgtcgattac
ggaaccgaccgccacggctttttgccgtttaaagaagtatcgcgttcgtatttcctcggc
tacgaaggcgggcgcgcgcgcattcaggacgtgctcaaagaaggcatggaagtcatcgtc
caagtcgaaaaagacgagcgcggcaacaaaggcgcggcgctgaccaccttcatcagcctc
gccggacgctatctggtattgatgccgaacaatccgcgcggcggcggcgtatcccgccgt
atcgaaggcgaagagcgtcaagaactcaaagccgcgatggcgcaactcgacattccgaac
ggcatgagcatcatcgcgcgtaccgccggcatcggccgcagcgcggaagagttggaatgg
gatttgaactacctcaaacaactctggcaggcaatcgaagaagcaggaaaagcgcatcac
gacccctacctgctctttatggaaagctcgttgctcatccgcgccatccgcgactacttc
cgtcccgacatcggcgaaattttggtggacaatcaagaagtttacgaccaagttgccgag
ttcatgagctacgtcatgccgggcaacgcaggtcgtctgaaactctacgaagaccacacg
ccgctgttttcccgcttccaaatcgaacaccagatcgaaagcgcgttctcgcgcagcgtc
agcctgccctccggcggcgcgatcgtcatcgaccacaccgaagccctcgtctccatcgac
gtgaactccgcacgcgccacacgcggcgcggacatcgaagacaccgccttcaaaaccaat
atggaagctgccgaagaagtcgcccgacaaatgcgcctgcgcgacttgggcggcttggtc
gtcatcgacttcatcgacatggaaaaccccaaacaccagcgcgatgtggaaaacgtcctg
cgcgacgcactcaaaaaagaccgcgcccgcgtacagatgggcaaactctcccgtttcgga
cttttggaattgagccgccaacgcctgaaacccgctttgggcgaaagcagccacgccgcc
tgtccgcgctgcgccggcaccggcgtgatccgcggcatcgaatccaccgccctgcacgtt
ttgcgcatggttcaggaagaagcgatgaaggacaacaccggcgaagtgcgcgcccaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcaatggaa
gagcgtttggatgtgaacgtcgtcctgattccgaacatccacctcgaaaatccgcactac
gaaatcaaccgcatccgcaccgacgacgtagaagaagacggcgaaccgagctacaagcgc
gttgccgagcctgaagaagacgaatccgccaaacctttcggcggcgaaaaagccaaagcc
gcccgccccgaacccgccgtcaaaggcgtgcgccacaccagccccgccccgactgccgcc
cccgagaaaaaaacctcctggtgggacagcttcaaagcatggctcaaacgcattttcggc
ggcagcgaaacccaagccgtacccgctgccgaaacctccgaaaaacgcagcacggcaaac
cgcagcggcagccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggc
agcaaaatagaagtccgcgaagcggcgggcaaaactgccggacagaaagcgcgcgccgac
aaagccgaaacgcgcaacaacggcaaccgccgccgcaacgaacgcggcgaccgtgccacc
gaacgcgccaacgaagcggaaatccaaagccgcaacgtacagcctgccgcacccgttgca
gatgccgcaccgcccgaaaccgaaggtcaaaccggaaaacgccgccgcaacggcagccgc
aacgaacgtggccaaaccgcaccggaaaccgccgccgttgccgaaacagccgttcagaca
gcggaaaacacgccgcccgaaccgtataccgcagaagacaaaggcagcaagcccaaatcc
gaacgcaaccgccgcgaacgcgacagccgcgatgccaaagaacgccgcgaacgcaacaat
cagcgcgaccgccgtcaaaacggcaaaaaacgcaatatcccgtctgccgccaaaatcgag
cagtacctgaatattcacgacaccgccgacaaagtccgttccgccgccgcgcacgttttc
ggcgaaaccgacgcaaacgcgccgattaccgtcagcattgccgatccgctcatcgccaca
cccgttcagacggcatcttccgccgtttcaaacggcgacgcactgatttatgatgcggcg
gaaaaaatccgccgtgccgccgccgacatcctgcccgaaggcgcggcaccgaaagccgca
gcacaggaaatgccgtctgaaaccgcaacctttacggctgcggcggaacaggcacgggaa
accgcacaaaccggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgg
gcggcacaacccgaagtccaagccggacgcggtttgcgccgttccgaacagccaaaaccg
tctgaagccgcaaccgtccctgccgaagaaatgatccaagtcgaaacccggcaaggctga
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