Neisseria gonorrhoeae FA 1090: NGO_1818
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Entry
NGO_1818 CDS
T00237
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ngo
Neisseria gonorrhoeae FA 1090
Pathway
ngo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ngo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGO_1818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngo03021
]
NGO_1818
03400 DNA repair and recombination proteins [BR:
ngo03400
]
NGO_1818
Enzymes [BR:
ngo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NGO_1818
Transcription machinery [BR:
ngo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NGO_1818
DNA repair and recombination proteins [BR:
ngo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NGO_1818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF1780
Motif
Other DBs
NCBI-ProteinID:
AAW90435
UniProt:
Q5F5V2
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All DBs
Position
complement(1793552..1794538)
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AA seq
328 aa
AA seq
DB search
MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVA
IAGVLHEYSTVGGVQEDVVDILLNIKGIVFKLHGRSQVQLVLKKSGSGVVSAGDIELPHD
VEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVVRDENRQIGAIQLDASFSPIS
RVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRSAARILIDQMSIFADLQGTPVEE
VEEKSPPIDPVLLHPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASKGLTLGSKLEAWPPVGLEKP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatagcacaaccgaatttttgaaacctcgtcaaattgatgtaaatactttttct
gcaactcgtgcaaaagtatctatgcagccatttgaacgtggtttcggtcataccttaggt
aatgctttgcgccgtatcttactgtcatccatgaatggttttgctcctactgaagtagct
attgccggtgtattgcacgaatattctactgttggtggtgttcaggaagatgttgttgac
attttgctgaatattaaaggtattgtgtttaaactccatggtcgtagccaagttcaactt
gtgttgaagaaatcaggttcaggtgtcgtatctgccggtgatattgagttgccgcatgat
gtagaaattctgaatcctggtcatgtcatttgtcatttggctgataacggtcaaattgaa
atggaaattaaagtagagcaaggtcgtggttatcaatctgtttcaggtcgtcaggtagtt
cgtgatgagaaccgtcagattggtgcaatccagttggatgcgagcttttcgcccatcagc
cgtgttagctttgaggttgaacctgcacgtgtagagcagcggacggatcttgataagttg
gttttggatatcgaaaccgacggttctattgatcctgaggaagctgtacgcagtgcggca
cgtattttgattgatcagatgtctatttttgctgatttgcagggtactcctgtggaggag
gttgaagaaaaatcacctcctatcgaccctgttcttttgcatccggtggatgatctggaa
ttgacagtacgttcagctaattgtttgaaagctgaggatatttattatattggcgatttg
attcaacgcactgaaaccgagcttcttaaaacgccgaatttgggacgtaaatctttgaat
gagattaaggaagtattggcatctaaaggtttgacactgggttctaagttggaagcatgg
ccacctgtaggcttggaaaagccttaa
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