Neisseria gonorrhoeae FA 1090: NGO_1850
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Entry
NGO_1850 CDS
T00237
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ngo
Neisseria gonorrhoeae FA 1090
Pathway
ngo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ngo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGO_1850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngo03021
]
NGO_1850
03400 DNA repair and recombination proteins [BR:
ngo03400
]
NGO_1850
Enzymes [BR:
ngo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NGO_1850
Transcription machinery [BR:
ngo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NGO_1850
DNA repair and recombination proteins [BR:
ngo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NGO_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AAW90471
UniProt:
Q5F5R6
LinkDB
All DBs
Position
complement(1815110..1819285)
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLNMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYVNKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTL
ATWDPHTRPMITEHAGMVKFENMEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRP
TVKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENILLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQGVE
QETAETQVTDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaaccgcaggtatggaagaagagtttgat
gccatcaaaatcggtattgcctctcccgaaaccatccgctcatggtcttatggcgaagtt
aaaaaacctgaaaccatcaactaccgtacgttcaaacccgagcgcgacggcttgttctgc
gccaaaatctttggcccggtcaaagactacgaatgcttgtgcggaaaatacaaacgattg
aaatttaaaggcgtaacctgtgaaaaatgtggcgtagaagttaccctgtccaaagtgcgc
cgcgaacgcatgggccatatcgaattggctgcacccgttgcccatatttggttcttgaaa
tccctgccttcccgcttgggtatggtattgaacatgacgttgcgtgatatcgaacgcgta
ttgtactttgaagcattcgtggtgaccgatcccggcatgactccgttgcaacgtcgtcaa
ttgctgactgaagacgattactacaacaaactggacgaatacggcgacgacttcgatgcc
aaaatgggtgcggaaggtatccgcgaattgttgcgaaccttggatgtagcaggcgaaatc
gaaatcctgcgccaagagcttgaatcgaccggttctgacaccaaaatcaaaaaaatcgct
aaacgcttgaaagtattggaagccttccatcgttccggtatgaagctggagtggatgatt
atggatgtgctgccggtattgccgcctgatttgcgtccgttggttccgttggacggcggc
cgttttgccacttccgatttgaacgatttgtaccgccgcgtcatcaaccgcaacaaccgt
ctgaaacgcctgctggaactgcatgcgcctgacatcatcgtccgcaacgaaaaacgtatg
ttgcaagaagcggttgattcgctgttggataacggccgtcgcggtaaagccatgaccgga
gccaacaaacgtccgctgaaatcgttggcagatatgattaaaggtaaaggcggccgcttc
cgtcaaaacctgttgggcaaacgtgtggactactccggccgttccgtgattaccgtaggc
ccatacctgcgtctgcaccaatgcggtttgccgaaaaaaatggcgttggaactgttcaaa
ccatttattttccacaaattggaaaaacaaggtttggcgtctaccgttaaagctgcgaaa
aaattggtagaacaagaagtacctgaagtatgggatatcttggaagaagtcatccgcgaa
catccgattatgttgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgttcgag
cctattctgatcgaaggtaaagcgattcagttgcacccattggtgtgtgccgcatttaat
gccgactttgacggtgaccaaatggcagtacacgttccattgagcttggaagcgcaaatg
gaagcacgcacgctgatgctggcttcaaacaacgtattgtctcctgccaacggcgaaccg
attatcgtaccttcccaagacatcgtattgggtctgtactacatgacccgcgaccgtatc
aatgccaaaggcgagggcagcctgtttgccgatgtgaaagaagtgcatcgtgcataccat
accaaacaggtcgagctgggtacaaaaatcaccgtacgtctgcgcgaatgggtgaaaaac
gaagcaggtgagtttgagcctgtcgttaaccgttacgaaacaaccgtcggccgtgcattg
ttgagcgaaatcctgccgaaaggcctgccgtttgaatatgtcaacaaagcgttgaagaaa
aaagaaatttccaagctgattaacgcatcgttccgcctgtgcggcttgcgcgatacggtt
atcttcgccgaccacctgatgtacaccggtttcggatttgcggcaaaaggcggtatttcc
attgccgttgacgatatggaaattccaaaagaaaaagcggccttgctggctgaagccaat
gccgaagttaaagaaatcgaagaccaataccgtcaaggtttggttaccaacggcgaacgc
tacaacaaagtggtcgatatttggggtcgtgccggcgataagattgctaaagcgatgatg
gacaacctgtccaaacaaaaagttatcgaccgtgacggcaacgaagtcgatcaagagtca
ttcaactccatttatatgatggcggactccggtgcccgtggttctgcggctcagattaaa
cagttgtccggtatgcgcggtttgatggcgaaacctgacggatcgattattgaaacgccg
attacctcaaacttccgcgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaagggtttggcggataccgcgttgaaaaccgcgaactccggttacctgacccgt
cgtctggtggatgtaactcaagacttggtcgttgttgaagacgattgcggtacttcagac
ggctttgtcatgaaggcagtggtacaaggcggtgatgtgattgaagcattgcgcgatcgt
attttgggtcgtgttaccgcgtctgacgttgtcgatccgtcaagcggcgagactttggtt
gaagccggtacgttgttgactgaaaaactggtggatatgattgaccaatccggtgtcgat
gaagtcaaagtccgtactccgattacttgtaaaacccgccacggtctgtgcgcgcactgt
tacggccgcgacttggcgcgcggcaaactggtcaatgccggcgaggcagtcggcgtgatt
gcggctcagtctattggtgaaccgggtacccagttgaccatgcgtacgttccacatcggt
ggtgcggcatcccgtgcggcagcagccagccaagtcgaagccaaatccaacggtacggca
cgtttcagcagccaaatgcgttatgttgccaacaacaaaggcgagttggttgtcatcggc
cgttcttgcgaagtcgtgattcacgatgacatcggccgtgaacgcgaacgccacaaagta
ccttacggtgccatcctgctggtacaagacggtatggccattaaagccggtcaaaccttg
gcaacttgggatccgcatacccgtccgatgattaccgaacatgcaggtatggtgaaattc
gagaacatggaagagggcgttaccgttgcaaaacaaaccgatgatgtaaccggtttgtcc
actttggtagtgattgacggtaaacgccgttcctctagtgcttccaaactgctgcgtccg
actgtgaaactcttggacgaaaacggcgtggaaatctgtattcccggtacgtccactccg
gtttcgatggcattccccgttggtgcggtgattaccgtacgcgaaggtcaggaaatcggt
aaaggcgacgtattggcgcgtattccgcaagcctcttccaaaacccgcgacattaccggc
ggtctgccgcgcgttgccgagctgtttgaagcacgcgtgccgaaagatgccggtatgctg
gcggaaattaccggtaccgtttccttcggtaaggagaccaaaggcaaacaacgtctgatt
atcactgacgtggacggtgtagcatacgagactttgatttccaaagagaaacaaattctg
gtacatgacggtcaagtggtaaaccgaggcgaaaccattgtggacggcgcggtcgatccg
cacgatattctgcgtctgcaaggtatcgaagcactggcacgctacattgtccaagaggtg
caagaggtttaccgcctgcaaggtgtgaagatttccgataaacacatcgaagtcatcatc
cgtcaaatgttgcgccgtgtgaacattgcggatgccggcgaaaccgggtttattaccgga
gagcaggtcgaacgcggcgatgtgatggcggccaatgaaaaagctttggaagaaggcaaa
gagccggcacgttacgaaaacatattgctgggtattaccaaagcctccctgtccaccgac
agcttcatttctgccgcatcgttccaagaaaccacccgtgtgttgaccgaagctgccatc
atgggcaaacaagacgaactgcgcggtctgaaagagaatgtcatcgtcggtcgcctgatt
cctgccggtaccggtttgacttatcaccgcagccgtcatcagcaatggcaaggggtagag
caggagactgctgaaacccaagtaacggatgaataa
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