Nocardia gipuzkoensis: LTT66_02420
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Entry
LTT66_02420 CDS
T07945
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp00470
D-Amino acid metabolism
ngp00550
Peptidoglycan biosynthesis
ngp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LTT66_02420 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LTT66_02420 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngp01011
]
LTT66_02420 (murD)
Enzymes [BR:
ngp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LTT66_02420 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ngp01011
]
Precursor biosynthesis
Amino acid ligase
LTT66_02420 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
UGT71903
LinkDB
All DBs
Position
complement(527109..528566)
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AA seq
485 aa
AA seq
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MLEFLRGRDVLVAGWGVSGRSLVEPLRDIGARPVVTDGGAAALAEAAELGLDVATGAELE
NADWSRFALVITSPGWRPDSPVLASAVAEGTPVWGDVEFAWWVDQARIYGPVRKWLVITG
TNGKTTTTQMTHAILRAAGIASVACGNIGLPILDALRRNPGPQVLAVELSSFQLHWAPSV
RPEAGVVLNVAEDHLDWHGGLDAYAAAKARALVGRVGVVGLDDPVAAALARKSKARRTVG
FRVGVPADGELGVVDGKLLDRAFTKAAILAEVGDISPPGPAGVADALAASALTRAIDVAP
QFVREGLIEHKVGPHRAAFVRELAGVDFVDDSKATNPHAARSSILAHPQVVWVAGGQLKG
AHVEDLVEEVADRLVAAVLIGADAPVLAAALARHAPEVPVIELVSGDDAGMGDEASRTAA
ADAVMARAVRAAAGFARRGDTVLLAPAAASLDMFADYTHRGRSFAAAVHALEDGDLGTTD
LGGLR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaattcctccgcggtcgcgacgttctggtggccggctggggtgtgtcgggacgc
tcgctggtcgaaccgctgcgcgacatcggcgcgcgcccggtggtcaccgacggcggcgcc
gctgccctggccgaggccgcggaactcgggctggacgtggccaccggcgcggagctggag
aacgccgactggagccggttcgcgctggtgatcaccagcccgggctggcggccggactcg
ccggtgctggcatcggcggtggccgagggcacaccggtgtggggcgatgtggaattcgcc
tggtgggtggatcaggccaggatctacggtccggtgcgcaagtggctggtgatcaccggc
accaacggcaagaccaccacgacccagatgacccacgcgatcctgcgcgccgccggaatc
gccagtgtcgcctgcggcaacatcggccttcccatcctcgacgcgttgcgccgcaacccc
ggtccgcaggtgctcgcggtcgagctgtcgtcgttccagctgcactgggcgccgtcggtg
cgcccggaggcgggcgtcgtcctcaacgtggccgaggaccacctggattggcacggcggc
ctggacgcctacgccgcggccaaggccagggcgctggtcggccgggtcggcgtggtcggc
ctggacgatccggtcgcggccgcgctcgcccgaaagtccaaagctcgccggaccgtgggt
ttccgggtcggggtgcccgccgacggcgagctcggcgtggtggacggcaagctgctcgac
cgcgcgttcaccaaggccgcgatcctggccgaggtcggcgacatcagcccgcccggaccc
gccggcgtcgccgacgcactggccgcgtccgcgctgaccagggcgatcgacgtcgctccg
cagttcgtgcgggagggcttgatcgagcacaaggtcggcccgcaccgcgccgcgttcgtg
cgcgagctggccggtgtcgatttcgtcgacgactccaaggccaccaatccgcatgccgcg
cgctcgtcgatcctggcccatccgcaggtcgtctgggtggccggtggccagctcaaaggc
gcgcacgtcgaggacctggtggaggaggtcgccgaccggctggtcgcggcggtgctgatc
ggcgccgacgcgccggtgctcgcggccgcgctggcacgacacgcacccgaggtccccgtc
atcgagctggtctcgggagacgatgcagggatgggtgacgaagcgtcgagaaccgccgcc
gccgacgccgtcatggcgcgggccgtgcgagcggccgccggtttcgcccgccgcggcgac
accgttctgctggctcccgccgccgcgtcactggacatgttcgccgactacacgcaccgc
ggccgcagcttcgccgcggcggtgcacgctctggaagacggtgacctggggaccaccgac
ctcgggggtttgcgatga
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