Nocardia gipuzkoensis: LTT66_05120
Help
Entry
LTT66_05120 CDS
T07945
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_05120
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LTT66_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
ResIII
SLFN-g3_helicase
AAA_30
CbiA
T2SSE
FtsK_SpoIIIE
AAA_19
Zot
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UGT69579
LinkDB
All DBs
Position
complement(1115727..1117409)
Genome browser
AA seq
560 aa
AA seq
DB search
MSTPQEKAAAARKAADEAARIAAEAAAAAEAAERELAEQTAKAARAEPVAEAKDLPAAQE
IAAGYAFGGSALELGAVVVDGTVDPTARVRIPTRMINRHGLVSGATGTGKTKTLQGIAEQ
LSSAGVPVVLADIKGDLSGLAEPGRQSEELTTRAAQTGADDWAPTGFPTEFVALGATGTG
LPIRATITSFGPVLLSKVLGLNETQESTLGLIFHWADRNGLALLDLKDLRAVITHLTSSE
GKEDLKGIGGVSAATAGVILRALVNLEADGGDTFFGEPELDPADLVRIVDGKGVITLFEL
GAQAARPVMFSTFLMWVLADLFQTLPEIGDADKPELVFIFDEAHLLFSDASKAFLEQVEQ
TVKLIRSKGVGVFFCTQLPTDIPNQVLSQLGARIQHALRAFTPDDQKALAKTVRTYPRTA
VYDLEQALTSLGIGEAIVTVLSEQGAPTPVAWTRLRPPRSLMDTIGADAITSRALSSPLA
SKYGRAIDRESAYEMLAARMAAAAREPQATPVPGRAATRTDEESAAERIMNNPAVRGFLR
SAATAAGRQITRSLFGTRRR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccccgcaggagaaggcggccgcggcgcgcaaggccgccgacgaggcggcgcgg
atcgcggcggaggcggccgcggcggcggaggccgcggaacgcgaactcgccgagcagacc
gcgaaagcggcgcgagccgagccggtcgccgaggcgaaagacctccccgccgcgcaggag
atcgccgcgggctacgccttcgggggcagtgcgctggagctgggagccgtcgtggtcgac
ggcacggtggaccccaccgcccgcgtgcgcataccgacgcggatgatcaaccggcacggc
ttggtctccggggcgaccggcacgggcaagaccaaaaccttgcagggcatcgcggagcag
ctgtcgagcgccggggttccggtggtgctcgccgacatcaaaggcgacctgtccggcttg
gccgagccggggcggcagagtgaagaactcacgacacgcgccgcgcagaccggcgccgat
gactgggcgccgaccggcttcccgaccgagttcgtcgcgctgggcgccaccggcaccggg
ctgccgatccgcgcgacgatcacctccttcggcccggtgctgctgagcaaggtgctcggg
ctgaacgagacgcaggaatccaccctcggcttgatcttccactgggccgaccgcaacggt
ctcgcgctgctggacctgaaggacttgcgcgcggtgatcacgcatctcaccagctccgag
ggcaaggaggacctcaaaggcatcggcggcgtctccgcggccaccgcgggagtgatcctg
cgcgcgctggtgaatctggaggccgacggcggcgacacgttcttcggcgagcccgaactc
gacccggccgacctggtgcggatcgtggacggaaagggcgtgatcaccctcttcgagctg
ggcgcgcaggcggcgcggccggtgatgttctccaccttcctgatgtgggtgctcgccgac
ctgttccagacgcttcccgagatcggcgacgcggacaagcccgaactggtcttcatcttc
gacgaggcccatctccttttctccgacgcctcgaaggctttcctggagcaggtggagcag
accgtcaagttgatccggtccaagggcgtcggcgtgttcttctgcacccagctgcccacc
gatatcccgaatcaggtgctctcccagctcggcgcgcgcatccagcacgcgctgcgcgcc
ttcaccccggacgaccagaaggcgttggcgaagaccgtccgcacctatcccaggaccgcc
gtctacgacctggagcaagcgctgacctcgctcggcatcggcgaggcgatcgtgacggtg
ctctccgagcagggcgcgccgacgccggtggcctggaccagactgcggccgccccgatcg
ctgatggacaccatcggcgcggacgcgatcacctcgcgggccctgtccagcccgctggcc
tcgaagtacggccgggccatcgaccgggagtcggcctacgagatgctcgccgcgaggatg
gccgcggcggcgcgggagccgcaggccactcccgttcccgggcgcgccgccacccgcacg
gacgaggagtccgccgccgaacggatcatgaacaaccccgcggtgcgcggcttcctgcgc
tcggccgccaccgcggccggccgccagatcacccgcagcttgttcggcaccaggcgccgc
tga
DBGET
integrated database retrieval system
