Nocardia gipuzkoensis: LTT66_10180
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Entry
LTT66_10180 CDS
T07945
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ngp03110
]
LTT66_10180 (clpB)
Chaperones and folding catalysts [BR:
ngp03110
]
Heat shock proteins
HSP100
LTT66_10180 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
nSTAND3
AAA_7
AAA_14
Mg_chelatase
IstB_IS21
TniB
AAA_24
AAA_3
NACHT
T2SSE
AAA_25
Zeta_toxin
bpMoxR
NBD_SMAX1
HOOK
AAA_19
FTA4
NYD-SP28
DNA_pol3_delta2
Mod_r
Motif
Other DBs
NCBI-ProteinID:
UGT70494
LinkDB
All DBs
Position
complement(2207538..2210093)
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AA seq
851 aa
AA seq
DB search
MDSFNPTTKTQAALTAALQAASAAGNPEIRPAHLLVALLDQTDGIAAPLLKAVGTDPATV
RREAQDIVDRLPRATGATTSPQLGREALAAITAAQHLATELGDEYVSTEHVMVGLADGDS
DVTMLLTKYGATADALRSAFTAVRGSARVTSPDPEGTYQALEKYSTDLTAEARSGKLDPV
IGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKSVVAL
DLGAMVAGAKYRGEFEERLKAVLEDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMI
KPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVLVGEPSVEDTIGILRGIKDRYEV
HHGVRITDSALVAAATLSDRYITSRFLPDKAIDLVDESASRLRMEIDSRPVEIDEVERAV
RRLEIEEVALAKETDDASKQRLDKLRAELADGREKLNQLTTRWQNEKNAIDQVRALKEEL
EALRGESERAERDGDLGKAAELRYGRIPALEKQLAAAEKTSATAGDGEVMLKEEVGPDDI
AEVVSSWTGIPVGRMLEGETQKLLRMEDELARRVVGQAEAVQAVSDAVRRARAGVADPNR
PTGSFMFIGPTGVGKTELAKTLADFLFDDERAMVRIDMSEYSEKHSVARLVGAPPGYVGY
DQGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDILLQVLDEGRLTDSQGRTVDFRNTILIL
TSNLGAGGDREFVMNAVRSAFKPEFLNRLDDVVMFHSLDEEQLESIVDIQLDQLQKRLAQ
RRLKLEVSDSARFWLAVRGYDPAYGARPLRRLIQQAIGDTLAKELLAGEVSDGDSVKVTV
SPDGDGLIVGR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgttcaatcccaccaccaagacccaggcggctctgacggccgctctgcaggcg
gcctccgccgcgggcaacccggagattcgtccggcgcacttgctggtggcgttgctggac
cagaccgacggcatcgccgcgcccttgctcaaggccgtcggaacggatccggcgaccgtg
cggcgtgaggcacaggacatcgtggaccggctgccccgggcgaccggcgccaccacctca
ccgcagctgggccgtgaggcactcgccgcgatcaccgcggcgcaacatctcgccaccgag
ctcggtgacgagtacgtctccaccgagcacgtgatggtcggtctcgccgacggcgactcc
gacgtgaccatgctgctcaccaagtacggcgccaccgccgacgcgctgcgttcggcgttc
accgcggtacgcggcagcgcccgcgtgaccagccccgatccggagggcacctaccaggcg
ctggagaagtactccaccgatctcaccgccgaagcccgctccggcaagctcgacccggtc
atcggccgcgacaccgagatccgccgggtggtccaggtgctgagccggcgcaccaagaac
aacccggtgctgatcggtgagcccggcgtcggcaagacggcgatcgtcgagggactcgcc
cagcgcatcgtggcgggcgacgtgccggagtcgctgcgcggcaagtccgtcgtggcgctg
gacctcggcgcgatggtcgctggcgcgaagtaccgcggtgaattcgaggaacggctcaag
gccgtgctggaggacatcaagaacagcgcgggccagatcatcaccttcatcgacgagctg
cacaccatcgtcggcgcgggcgccaccggggaatcggcgatggacgcgggcaacatgatc
aagccgatgctggcccgcggcgagttgcgcctggtcggcgcgaccacgctggacgagtac
cgcaagcacatcgagaaggacgccgccttggagcggcgcttccagcaggtactggtcggc
gagccgtcggtggaggacaccatcggcatcctgcgcggcatcaaggatcgctacgaggtg
caccacggcgtgcgcatcaccgactccgcgctggtcgccgcggccacgctgtcggaccgc
tacatcacctcccggttcctgccggacaaggcgatcgacctggtcgacgagtcggcgtcg
cggttgcgcatggagatcgactcccgcccggtggagatcgacgaggtggagcgcgcggtg
cgcaggctggagatcgaagaggtcgccctggccaaggagaccgacgacgcctccaagcag
cggctggacaaactgcgcgcggaactcgccgacggcagggagaagctcaaccagctgacc
acccgctggcagaacgagaagaacgccatcgaccaggtgcgcgcgctcaaagaggaactg
gaagcgctgcgcggtgaatccgaacgcgccgagcgcgacggcgacctcggcaaggcggcc
gagctgcgctacggacggatccccgcactggagaagcaactcgccgcggccgaaaagacc
tccgccaccgcgggagacggcgaggtcatgctcaaagaggaggtcggcccggacgacatc
gccgaggtggtgtcctcgtggaccggcatcccggtgggccggatgctggaaggggagacg
cagaagctgctgcgcatggaggacgagctggctcgccgcgtggtcggtcaggccgaggcg
gtgcaggcggtgtcggacgcggtgcgccgggcgcgcgccggtgtcgccgatccgaaccgc
ccgaccggctcgttcatgttcatcggccccaccggtgtcggcaagaccgagctggcgaag
acgttggcggacttcctgttcgacgacgagcgcgccatggtccgcatcgacatgagcgag
tacagcgagaagcactcggtggcccggctggtcggcgctccgcccgggtacgtcggctac
gaccagggcggccagctcaccgaggcggtgcggcgcaggccctacacggtggtgctgttc
gacgagatcgagaaggcgcacccggacgtgttcgacatcctgttgcaggtgctcgacgag
ggcaggctcaccgacagccagggccgcacggtggacttccgcaacaccatcctcatcctg
acctcgaacctgggtgcgggcggtgaccgcgagttcgtcatgaacgcggtgcgttcggcg
ttcaagccggagttcctcaaccgcctcgacgacgtggtgatgttccactcgctggacgag
gagcagctggagagcatcgtcgacatccagctcgaccagctacagaagcggctggcgcag
cgcaggctgaagctggaggtcagcgattcggcccggttctggctcgccgtgcgcggctac
gaccccgcctacggcgcgcgcccgttgcgcaggctgatccagcaggccatcggcgacacc
ctcgccaaggaactgctcgcgggcgaggtctccgacggcgacagcgtcaaggtgaccgtc
agccccgacggcgacggcctgatcgtcgggagatga
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