Nocardia gipuzkoensis: LTT66_11815
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Entry
LTT66_11815 CDS
T07945
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngp03032
]
LTT66_11815 (gyrB)
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_11815 (gyrB)
Enzymes [BR:
ngp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LTT66_11815 (gyrB)
DNA replication proteins [BR:
ngp03032
]
Prokaryotic type
DNA Topoisomerases
LTT66_11815 (gyrB)
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LTT66_11815 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UGT70790
LinkDB
All DBs
Position
2580490..2582535
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AA seq
681 aa
AA seq
DB search
MAAKDSTASGSTRATGKQDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN
SVDEAMAGYATKVEVTLLADGGVEVVDDGRGIPVAMHAQGVPTIEVVMTQLHAGGKFDSD
SYAVSGGLHGVGISVVNALSSRLEAEIDRDGYHWSQTYKDSTPGKLVQGEPTKKTGTTIR
FWADPEIFETTTYNFETVARRLQEMAFLNKGLTIKLTDERVSESDVTDEVVSETAEAPKH
ADESAAPAEHKVKTRTYHYPGGLEDFVRHINRTKQAIHNSVVGFTGKGTGHELEVAMQWN
SGYSESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDGNLTGDDIREGL
AAIVSVKVGEPQFEGQTKTKLGNTEVKSFVQRTCNEHLTHWFEANPADAKTIVNKAVSSA
QARVAARKARELVRRKSATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAGGSAKSGRDSM
YQAILPLRGKIINVEKARIDKVLKNNEVQSIITAFGTGIHDEFDIGKLRYHKIVLMADAD
VDGQHISTLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAG
LAAGKKINKDDGVQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAAAADELFSVLMGE
DVEARRSFITRNAKDVRFLDV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccaaagactccaccgcatcgggttcgaccagagcgaccgggaagcaggactac
ggtgcctcctccattacggttctcgaggggctcgaggcggttcgcaagcgtccgggcatg
tacatcggctctaccggtgagcgtggtctgcaccacctgatctgggaggtcgtcgacaac
tccgtcgacgaggcgatggccgggtacgcgacgaaggtcgaggtcaccctgctggccgac
ggcggcgtcgaagtggtggacgacggtcgcggcatccccgtggcgatgcacgcccagggc
gtgccgaccatcgaggtcgtcatgacgcagctccatgcgggcggcaagttcgactcggat
tcctacgcggtgtccggtggtctgcacggcgtcggtatctccgtggtcaacgcgctgtcg
agtcggctggaggccgagatcgaccgcgacggttaccactggagccagacctacaaggat
tccacccccggcaagctggtccagggtgagccgaccaagaagaccggtacgaccatccgt
ttctgggcggaccccgagatcttcgaaaccaccacctacaacttcgagacggtggcccgc
aggctgcaggagatggcattcctgaacaagggactgaccatcaagctcacggacgaacgc
gtcagcgaatccgacgtcaccgacgaggtggtcagcgaaaccgccgaagcgcccaagcac
gccgacgagagcgccgcgcccgccgagcacaaggtgaagacccggacctatcactatccg
ggcggtctggaggacttcgtccgccacatcaaccgcaccaagcaggcgatccacaactcg
gtcgtcgggttcaccggcaagggcaccggccacgagctcgaggtggcgatgcagtggaac
tccggttactccgagtcggtgcacaccttcgccaacaccatcaacacccacgagggcggc
acgcacgaagagggcttccgcgcggcgttgaccacggtggtcaacaagtacgcgaaggac
aagaagctcctcaaggagaaggacggcaacctcaccggtgacgacatccgtgagggcctg
gccgccatcgtgagcgtcaaggtcggcgagccgcagttcgagggccagacgaagaccaag
ctcggcaacaccgaggtgaagtcgttcgtgcagcgcacctgcaacgagcacctcacccac
tggttcgaggccaacccggccgacgcgaagaccattgtgaacaaggcggtctcctcggcg
caggcccgtgtcgcggcgcgcaaggcgcgcgagctggtgcggcgcaagtccgcgaccgac
ctgggcggcctgcccggcaagctggccgactgccggtccaaggatccgagcaagtccgag
atctacatcgtcgagggtgactccgcgggcggctcggccaagtccggccgcgactcgatg
taccaggcgatcctgccgctgcgcggcaagatcatcaatgtcgagaaggcgcgaatcgac
aaggttctcaagaacaacgaggtccagtcgatcatcaccgcgttcggcacgggtatccat
gacgagttcgacatcggcaagctgcggtatcacaagatcgtgctgatggccgacgccgac
gtcgacggccagcacatctcgacgctgctgctcacgctgctgttccgtttcatgcgcccg
ctggtggagcacgggcacgtgtacctggcgcagcctccgctctacaagctcaagtggcag
cgcagcgatccggagttcgcctattccgatcgcgagcgtgacggtctgctcgaagcgggg
ctcgccgcgggcaagaagatcaacaaggacgacggcgtgcagcgctacaagggcctcggt
gagatgaacgccaaggagctgtgggagacgaccatggatcccgcggtgcgggtgcttcgt
caagtgacgctcgatgacgcggctgctgcggacgaactgttctcggtcctgatgggcgag
gacgtggaggcgcgtcgcagcttcatcacccgcaatgccaaggacgttcgcttcctcgac
gtatag
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