Nocardia gipuzkoensis: LTT66_14120
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Entry
LTT66_14120 CDS
T07945
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp03030
DNA replication
ngp03430
Mismatch repair
ngp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LTT66_14120
03430 Mismatch repair
LTT66_14120
03440 Homologous recombination
LTT66_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngp03032
]
LTT66_14120
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_14120
Enzymes [BR:
ngp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LTT66_14120
DNA replication proteins [BR:
ngp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LTT66_14120
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LTT66_14120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
DnaX_C
AAA_16
Mg_chelatase
AAA_19
Rad17
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UGT71181
LinkDB
All DBs
Position
3117096..3119846
Genome browser
AA seq
916 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTDPLSIALDTGRISHAYLFSGPRGCGKTSSARILARSLN
CAEGPTSTPCGTCPSCVALGPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTTAGFNALLKIVEEPPAHLIFIFATTEPDKVLPTIRSRTHHYPFRLLPPA
TMRGLLGRICEQEHVPVEEAVYPLVIRAGGGSPRDSLSVLDQLLAGAGPEGVTYARAVSL
LGVTDVALIDDAVEALAADDGAVLFGTVDRVMEAGHDPRRFAVDLLDRFRDLILLRAVPD
ATERGLVTGPGDVLERMRDQAARLGSATLTRYAELLHEGLGEMRGATAPRLLLEVVCARM
LLPSVSDTESATLQRLERLERGLAAGSFAAAPAASSPAAPTQPPAAGGPPSEPPRRRGAE
ALAAIRRESPAPVGPGGSSSSGSTAVVPGGGASGGGGESAGAGEGRRPTSADSVAPGVGV
EGGADRIAPVAEPRFDPGSGGGAAGMTSGGPSAHSGTPQSGTAESSGGPDVAVTRGASAG
AGRLPSESGAPQRISDDVAGSGLSPAAQAADSRASSAQVPGPAAGRDPVAADSAVVRSSP
AGHGDRDRSGASASRVPGASASEVPGASASRLPDAPATGATDATATGAPSSEPASDPSSA
PSGDLLREVEAAWVDIRAKVREFGAAVQAMLAGASVARVEGEVIVFAHQHAPLAQRLSDP
RNLEAVRSAVRAVLGRDHEVRWEAGGAAPRPAAAPRSGGAGNRTRGQAGNQPGRESGNAA
GRAPDAAAPPRFSRPSQTRNGGADKSGNAGRSRATGANPRPYPADDDIPPPDYPDLPDDP
GPADYPPPYDAEPSGNDAASGRSGAGDGVVPASTPEEEQEMMAAAADPVAPGDRRDPDEV
ALELLKSELGATRLDG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtaccggaagtaccgaccggcaacgttcgctgaggtggtgggtcaggagcac
gtcaccgacccgctgagtatcgcgctcgacaccgggcggatcagtcatgcctatctgttc
tccggtccgcgcggctgcggtaagacgtcgtccgcgcgtattctcgccagatcgctgaac
tgcgcggaggggcccacatcgacgccctgcggcacctgcccgtcctgcgtcgcgctcggc
cccggcggtccgggcaacctggacgtcatcgaactcgacgccgcgagccacggcggtgtc
gacgacaccagggaattgcgcgaccgcgccttctacgcacccgccgagtccaggtaccgg
gtgttcatcgtggacgaggcgcacatggtgaccaccgccggattcaacgcgctgctcaag
atcgtcgaggagccgccggcgcatctgatcttcatcttcgccaccaccgagccggacaag
gtgctgcccaccatccgctcgcgcacgcaccactacccgttccggctgctgccgcccgcc
acgatgcgcggcctgctcggccggatctgcgagcaggagcacgtgccggtcgaagaagcg
gtgtaccccttggtgattcgcgcgggtggcggttcgccgcgcgatagcctgagcgtgctc
gaccaactgctggcgggtgcgggcccggagggcgtcacctatgctcgcgcggtctcgctg
ctcggcgtcaccgacgtggcattgatcgatgacgcggtcgaggcgctggccgccgacgac
ggcgccgtgttgttcggcaccgtcgaccgggtgatggaggcgggccacgacccacgtcgt
ttcgccgtcgatctgctcgatcgcttccgcgacctgattctcttgcgcgcggtgcccgac
gccaccgaacgcggtttggtcaccgggcccggcgacgtgctcgagcggatgcgcgaccaa
gccgcgcggctgggctcggccaccctgactcgttacgccgagctgctgcacgaaggtctc
ggggagatgcgcggcgcgacggcgccgcgactgctgctcgaagtcgtctgcgcgcgcatg
ctgctgccatcggtgtcggataccgaatccgccacgctgcagcggttggaacggctggag
cgcggtctggcggctggctcgttcgccgctgcccccgccgcgtcctcgccagccgctccc
acccagccgccggcggcgggcggacccccgtcggagccgccccgccgccgtggggcagag
gcactggcagcgattcgccgcgagagtcccgcgccggtcggaccgggggggagctcgtcg
tccggttccactgccgtagtgcctggtggcggagcctctggcggtggtggcgaatccgcg
ggtgccggagaaggtcgtcggccgacctccgcggactcggttgcgccgggtgtgggtgtc
gagggcggcgcagatcgtattgcgccggtcgccgagccgcgcttcgatcccggatctggc
ggcggtgcggcagggatgacgtcgggagggccgagcgcgcactcgggtactccgcagagt
ggaacggccgaatcgtccggggggcctgacgtcgccgtcacccgcggtgcgagtgcggga
gcggggcgccttccttccgaatccggggcgccgcagcggatttccgacgatgtcgcgggt
tcggggctctctccggcggcgcaggcagcggattctcgggcatcgagcgcgcaggtgccg
ggcccggccgccgggcgcgaccccgtggccgccgattcggccgtcgtgcgaagttccccc
gccgggcacggcgatcgggatcgatccggcgcgtctgcgtcccgcgtgcccggcgcgtct
gcgtccgaggtgcccggcgcgtctgcgtcccgcctgcccgacgcgcccgcgaccggcgcg
accgacgcgaccgcgaccggcgcgccgtcatcggagcccgcttccgatccttcctccgcg
ccgagtggtgatctgttgcgcgaggtggaggccgcctgggtggatatccgggccaaggtg
cgtgagttcggcgccgccgtgcaggcgatgctcgccggtgcgtcggtcgcccgagtggag
ggcgaggtgatcgtcttcgctcatcagcacgcgccgctggcgcagcgattgtccgatccg
cggaatctggaagcggtccggtccgcggtgcgcgcggtgctcggtcgcgaccacgaagtg
cgctgggaagcgggtggcgcggcgccacgtcccgcggccgcgccccggtccggcggtgcg
ggcaaccgcacccgcgggcaggcgggcaatcagccgggacgtgaatccggcaacgcggcg
ggccgtgctccggacgccgccgccccgccgcggttctcgcgcccgagccagacccggaac
gggggcgccgacaagtcgggcaacgccgggcgctcgcgcgcgaccggcgcgaacccgcgc
ccgtatcccgcggacgacgacatcccgccgcccgactaccccgacctcccggacgatccc
ggccccgcggattatccgccgccgtatgacgccgaaccgagcggaaacgacgcggcgagc
ggccgcagcggggccggtgacggcgtcgtccccgcctcgacgccggaagaggagcaggag
atgatggccgccgcggccgacccggtcgctcccggcgaccggcgcgacccggacgaggtc
gccctcgaattgctgaagagtgagctgggtgccacacggctggatggttga
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