Nocardia gipuzkoensis: LTT66_17895
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Entry
LTT66_17895 CDS
T07945
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngp03016
]
LTT66_17895
Enzymes [BR:
ngp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LTT66_17895
Transfer RNA biogenesis [BR:
ngp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LTT66_17895
Prokaryotic type
LTT66_17895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UGT71845
LinkDB
All DBs
Position
4033023..4033940
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AA seq
305 aa
AA seq
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MSQRELVVLGTASQVPTKQRNHNGYLLRWDDESILFDPGEGTQRQMTYAGVTVTGLTRIA
ITHFHGDHSLGLAGVVQRINLDRVPHPVDVVFPASGAAYYDRLVNATSYYHRAELRPRPM
IGPGPVDLPEAPFTVTAVRLSHPVDTFGYRLSEPPGRRILPDRLRALGLRGPVISELQQR
GSVEFGGRTVTLAEISEPRSGQSFAFVMDTRLCAGVQELAADVDMLVIEATFLDADENLA
TEYGHLTAGQAARAAADAGARALVLTHFSQRYRDLDEHFTEAAKYFSGEIHIATDLARIP
LPPRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcagcgtgagttggttgttctcggtaccgcgagccaggtgccgacgaaacagcga
aaccacaacgggtacctgctccggtgggacgacgagtcgatcctgttcgaccccggtgag
ggtacgcagcggcagatgacctacgccggtgtcaccgtcaccgggctcacccggatcgcc
atcacccatttccacggcgaccacagcctcggcctcgccggagtcgtgcagcggatcaat
ctcgatcgggtgccccatccggtggatgtcgtcttcccggcgtcgggcgcggcgtattac
gaccgcctggtcaacgcgacgtcctactatcaccgcgccgagctgcgaccgcgtccgatg
atcggccccggccccgtggacctgcccgaggcgccgttcacggtgaccgcggtccggctc
tcgcatccggtggacaccttcggctatcggctcagcgagccgcccggccggcgcatcctg
ccggaccggttgcgcgccctggggctgcgcggccccgtcatctccgagctgcaacagcgc
ggcagcgtcgagttcggtgggcgcacagtcactttggcggagatcagcgagccacgatcc
ggccagagtttcgccttcgtcatggacacccggctgtgcgccggtgtccaggaactcgcc
gccgacgtcgacatgctcgtcatcgaagccactttcctggacgccgatgaaaacctggcc
accgaatacggccacctcaccgcaggccaggcggcgcgggcggccgccgacgccggtgcc
cgcgccctggtcctgacccacttttcgcagcgctaccgcgacctcgacgagcacttcacc
gaagcggcgaagtacttctccggcgagatccacatcgccaccgacctcgcccgaatcccg
ctgccgccccgccgctga
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