Nocardia gipuzkoensis: LTT66_18750
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Entry
LTT66_18750 CDS
T07945
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_18750
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTT66_18750
Archaeal homologous recombinant proteins
LTT66_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
TsaE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UGT65405
LinkDB
All DBs
Position
4162360..4165545
Genome browser
AA seq
1061 aa
AA seq
DB search
MRLHKLEMIAFGPFAEPTVVDFDALGADGLFLLHGQTGAGKTTVLDAIAFALYGRVPGAR
GESKRLHSDHAPEHTPPQVTLEATLGGRRLRLTRSPEFQRRKRDGTGLRTINPKATLTWL
DGRGENLSRIPDIGEEVLRLLGMSADQFFQVVLLPQGDFARFLRADNEDREKLLEKLFDT
GRFGTAEHWLAEQRRAAEAELDARTDGIKRLITQVGMAAGVADSAGLTECVGWSQDLLSS
ARADLATAVAELERCQRESARARERADQQRRLHELRRRMSAARAQLDDYAAGAELRAAAQ
AELELARRAEPVAAAIDEARSAVRIQRQRDGEERDAARRLAARLLEPASVELGGTELVDP
DGAQVRDDADIDAAIQRWSGQIGALDEVLTVAAGATRLEGELGALRTEDATLARRVTELA
ARRDELPAALTAAEARLREATEAVAALPGITSETERLQAAATAAVELAARRTDLDHARVE
FDAARSAHLDARELVLELRERRLSGMAAELAGGLVAGSPCAVCGSAEHPAPARPTDTAVS
KDEEEAAVAAERAAEDTRDRALARITGLEREIEALLARGGDTDRVELAAVLRAATDRYED
TSELAAGAEGLRIELTRLRDDEARLHDELRACEARRSAVAATIVSAQSRLTELTERLRAA
AGADETVDRRRARLAALVAEAAALRDARAEAAAAREQVSLIADRVEKLARAAGFVPEGEF
GAALPADSSSADLSGAGSAVPEKSGEVVRPGSGSAGADEPVHRDATARDNVALLTAYAKV
VAVAARGPQRQAEIEADLVAADRARAAAEAVLAEPEIRAASEQEPGDLAELDALVAAAQN
ELNAAVAAHAEASRRASQLEDLGGQLWAAVDRIAPARQAFEELDGLADVVAGRGANNRRM
SLHSYVLAARLEEVAQAGSLRLRRMSGGRYEFVHSDKAGPRGRRGGLGLDIRDDYTGAVR
PAKTLSGGETFMASLSLALGLADTVAAESGGLVLDTLFIDEGFGGLDADTLDAVMGVLDE
LRAGGRVVGVVSHVDEMRQRIPSRLHVLRGRAGSRLQATLA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcacaagctggagatgatcgcgttcggtccgttcgccgagcccacggtcgtc
gacttcgacgcgctcggcgccgacggtttgttcctgctgcacggccagaccggcgccggc
aaaaccacggtgctggacgcgatcgcgttcgcgctctacggcagagtccccggcgcacgc
ggggagagcaagcggctgcattccgatcacgcaccggagcacacgccaccgcaggtgacg
ctggaggcgacgctgggtggacggcggctgcggctcacgcgcagccccgagttccagcgt
cgcaagcgagacggcaccggcctgcgcaccatcaacccgaaggcgacgctgacctggctg
gacggccgcggggagaacctctcccgaatacccgatatcggcgaggaggtgctgcgcctg
ctcggcatgagcgccgaccagttcttccaggtggtgctgcttccgcaaggcgatttcgcc
cgattcctgcgggccgacaacgaagatcgggagaagctgctcgaaaagctcttcgacacc
ggacgtttcggcaccgccgagcactggctcgccgagcagcgccgcgccgccgaagcggag
ttggacgctcgtacagacggcatcaagcggctgatcacccaggtgggtatggcggcgggg
gtggcggattcggccggtctgacggagtgcgtgggttggtcacaggacctgctgtccagc
gcccgcgccgatctggctaccgccgtggcggaactcgaacgctgccagcgagaatcggcc
cgcgcccgcgagcgggccgaccagcagcgtcggctgcacgagctgcgccgccgcatgtcc
gccgcgcgtgcccaactggacgactacgccgcaggcgccgagcttcgggccgcggcacag
gccgaactcgaactcgcgcgccgggccgagccggtggccgccgccatcgacgaagcgcgt
tcggcggtgcgcatccagcggcagcgcgacggcgaagagcgtgacgcggcgcgacgactg
gcggcccggctcctggaaccggcgagcgtggaactcggcggtaccgagctggtcgatccc
gatggcgcgcaggtgcgcgacgacgccgacatcgacgcggcgatccagcgctggagcggg
cagatcggcgcactggacgaagtgctgaccgtcgccgccggcgccacccggctcgagggt
gaactcggcgcgctgcgcaccgaggacgcgacgctcgcccggcgcgtcaccgaactcgcc
gcgcggcgcgacgagctgcccgccgcgctcaccgcggccgaggccaggctgcgcgaagcc
accgaagcggtcgcggcgttgcccggaatcaccagcgaaaccgagcggttgcaggccgcc
gcgacggcggcggtcgaactggccgcccgccgtaccgacctcgaccacgcccgagtcgag
ttcgacgccgcccgctcggcacacctcgacgccagagaactcgtgctggaactgcgcgag
cgcaggctgtccggcatggccgccgaactggctggtgggctggtcgccggaagtccgtgc
gcggtctgcggttccgcggagcatccggcgcccgcccggcccaccgacaccgcggtgtcc
aaggacgaggaggaagccgccgtggcggccgagcgcgcggcggaggacacccgtgaccgc
gcgctggcccgcatcaccgggctggagcgggagatcgaggcgctcctcgcccgcggcggc
gacaccgaccgcgtcgaactcgccgcagtcctgcgcgccgcgaccgaccgctacgaggac
acctccgaactggccgccggcgccgaggggctgcgcatcgaactgacccgtttgcgcgac
gacgaggcgcgcctgcacgacgagctgcgcgcctgcgaagcgcgtcgcagcgcggtcgcc
gccaccatcgtgtccgcgcagtcgcgccttaccgagctcaccgaacggctgcgcgccgcg
gcgggcgccgacgagaccgtcgaccggcgccgtgcccggctcgctgccctcgtcgccgag
gccgccgccctgcgcgatgcgcgcgcggaagcggcggcggcgcgggaacaggtctcgctg
atcgcggatcgggtcgaaaagttggctcgtgccgcgggtttcgtgccggaaggcgagttc
ggtgcggcgctgcccgcggactcctcgtcggcggatctctccggggcaggatcggcggtt
cccgagaaatccggcgaggtggtccgccccggctcgggctccgctggtgcagacgaaccg
gtgcaccgcgacgccaccgcccgtgacaatgtcgcacttctgaccgcgtacgcgaaggtc
gtcgcggtcgcggcgcgcggcccgcagcggcaagcggagatcgaagcggacctcgtggcg
gccgaccgcgcccgtgccgcggcggaagccgtcctggcggaaccggagatccgtgcggcg
tcggagcaggagcccggcgacctggccgaactcgacgcgctcgtggcggccgcgcagaac
gaactcaacgccgcggtggccgcgcacgccgaggcgagcaggcgggcgagccagctcgag
gacctcggcggtcagctctgggccgccgtggaccggatcgccccggcccggcaggcgttc
gaggaactggacggcctcgccgacgtggtcgccgggcgcggtgcgaacaaccgccgcatg
tcgctgcactcctacgttctggccgctcgcttggaagaggtcgctcaggccgggtcgctg
cggttgcgcaggatgtccggaggccgctacgaattcgtgcactccgacaaggccggtccg
cgcggtcgccgaggcgggctcggcctcgacatccgtgacgactacaccggagctgtccgc
ccggccaagactctctccggcggtgagaccttcatggcgtcgctgtcgctggcgctgggc
ttggccgacaccgtcgccgccgaatcgggcggcctggtgctggacaccctgttcatcgat
gagggcttcggcggcttggacgccgacaccctggacgccgtgatgggcgtgctcgacgaa
ctccgcgcgggcggccgggtggtcggcgtcgtcagtcacgtggacgagatgcgccagcgc
atcccgagccgcctgcacgtcctccgtggccgcgcaggctcccgtttgcaagcgaccctc
gcctga
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