Nocardia gipuzkoensis: LTT66_22905
Help
Entry
LTT66_22905 CDS
T07945
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngp03032
]
LTT66_22905
03036 Chromosome and associated proteins [BR:
ngp03036
]
LTT66_22905
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_22905
DNA replication proteins [BR:
ngp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LTT66_22905
Chromosome and associated proteins [BR:
ngp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LTT66_22905
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LTT66_22905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
UGT66146
LinkDB
All DBs
Position
5056640..5057299
Genome browser
AA seq
219 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEHVVDTIVRAVHKGQSVTITGFGVFEQRKRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGKQKLAATGPAVKRGVNAPVAAKKAAAKKT
AAKKTAAKKSTPTKAPAKSTARKAAAKAPAKTTARKTTATKTAAKKAPAKKTAVAKKAPA
KKTATKATAAKSTAAKKTAAKKAPAKKTAAKKAPARRAR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgacgttctgaccgaaaagttgggtacggacaggcgcacg
gccaccgcggcagtcgagcatgtggtcgacaccatcgtgcgcgcggtgcacaagggtcag
agcgtcacaatcaccggattcggtgtgttcgaacagcgtaagcgggcggctcgcgtcgca
cggaacccgcgtaccggcgaaaccgtgaaggtcaagcccacttcggtgcccgcgttccgc
cccggcgctcagttcaaggcggtgatagcgggtaagcagaaactggccgcgaccgggccc
gccgtcaagcgcggggtgaatgcgccggtggccgcgaagaaggcggcggcgaagaagacg
gcggccaagaagaccgccgccaagaagtcgacgccgaccaaggcgcccgccaagagcacg
gcccgtaaggccgccgccaaggccccggcgaagaccaccgctcgcaagacgaccgccacc
aagaccgctgcgaagaaggcgcccgcgaagaagaccgcggtcgcgaagaaggctccggcc
aagaagacggccaccaaggccacggcggccaagtccaccgccgccaagaagaccgccgcc
aagaaggcacctgcgaagaagaccgcggccaagaaggccccggctcgccgagctcgctga
DBGET
integrated database retrieval system
