Nocardia gipuzkoensis: LTT66_23220
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Entry
LTT66_23220 CDS
T07945
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp02024
Quorum sensing
ngp03060
Protein export
ngp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LTT66_23220 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LTT66_23220 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTT66_23220 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ngp02044
]
LTT66_23220 (ffh)
Enzymes [BR:
ngp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LTT66_23220 (ffh)
Secretion system [BR:
ngp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LTT66_23220 (ffh)
Eukaryotic Sec-SRP protein
LTT66_23220 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_31
APS_kinase
nSTAND3
AAA_24
Zeta_toxin
cobW
AAA_22
AAA_16
AAA_18
TctA
AAA_30
NACHT
AAA_33
ABC_tran
NPHP3_N
6PF2K
MobB
NTPase_1
Thymidylate_kin
AAA_5
AAA_25
TsaE
ATP_bind_1
NB-ARC
Mg_chelatase
ResIII
KAP_NTPase
MeaB
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UGT66201
LinkDB
All DBs
Position
5129570..5131129
Genome browser
AA seq
519 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLSPADIDATCREIRLALLEADVALPVVRGFIGRIKERAK
GAEVSAALNPAQQVVKIVNEELVGILGGETRRLNLAKNPPTVVMLAGLQGSGKTTLAGKL
AKLLKTQGHQPLLVACDLQRPGAVTQLQVVGERAGVPVYAPHPGTSVGGGDNPLGISAAD
PVNVARGGVEEARQKQYDVVIVDTAGRLGIDEELMRQAAGIRDAVQPDETLFVLDAMIGQ
DAVNTAEAFRDGVGFTGVALTKLDGDARGGAALSVREVTGVPILYASTGEKLEDFDVFHP
DRMASRILGMGDVLTLIEQAEQVYDAKQAEEAARKIGSGELTLEDFLDQMLAIRKMGPIG
NLLGMLPGAGQMKDVLAQVDDKQLDRVQAIIRGMTPAERENPKIINASRRLRISNGSGVQ
VSEVNQLVDRFFEAKKMMAMMGRQMGLPGSRRGNAKKGKKGKKGRGPTPPKVRGGFPGMG
GMPGMPAGMPDLSNMPAGLDQLPPGLDGFDLSKLKFPKK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctgtccgaccggcttaccggtgccctcaaggatctgcgcggcaagggg
cgtctgtcaccggccgacatcgacgccacctgtcgggagatccgcctcgccctgctcgag
gccgacgtcgcgctgcccgtggtccgcggtttcatcgggcggatcaaggagcgcgccaag
ggtgcggaggtctccgcggcgctgaacccggcccagcaggtcgtgaagatcgtcaacgag
gagctcgtcggcatcctcggcggcgagaccaggcggctgaacctggccaagaacccgccg
acggtggtcatgctggccggtctgcagggttccggtaagaccacgctggcgggcaagctc
gccaaactgctcaagacgcagggccatcagccgctgctggtggcctgcgacttgcagcgc
cctggcgccgttacccagctgcaagtggtcggcgagcgcgcgggcgtgcccgtctacgcg
ccgcacccgggcacctcggtcggtggcggtgacaacccgctgggcatctcggccgccgat
ccggtgaacgtggcgcgcggcggtgtcgaggaagcgcggcagaagcagtacgacgtcgtc
atcgtggacaccgcgggccgcctcggcatcgacgaggagctcatgcggcaggccgcgggc
atccgcgacgccgtgcagccggacgagaccctgttcgtgctggacgcgatgatcggccaa
gacgcggtgaacaccgccgaggcgttccgcgacggcgtcggcttcaccggcgtggcgctc
accaagctggacggcgacgcccgcggtggcgcggcgctgagtgtccgcgaggtcaccggc
gtcccgatcctgtacgcctcgaccggtgagaagctcgaggacttcgacgtcttccacccc
gaccgcatggccagccgcattctcggcatgggtgacgtgctcactctgatcgagcaggcc
gagcaggtctacgacgccaagcaggccgaggaggccgcccgcaagatcggcagcggcgaa
ctcaccctcgaggacttcctcgaccagatgctggccattcgcaagatgggcccgatcggc
aacctgctcggcatgctgccgggcgcgggccagatgaaggacgtgctcgcgcaggtcgac
gacaagcaactcgaccgcgtacaggcgatcattcgcggcatgactccggccgagcgggag
aatcccaagatcatcaacgcgtcccgccgcctgcgcatctccaacggctccggcgtccag
gtctccgaggtcaaccagctcgtcgaccggttcttcgaggccaagaagatgatggcgatg
atgggccgccagatgggcctgcccggctcgcgccgcggcaacgcgaagaaaggtaagaag
ggcaagaagggccgcggcccgacgccgccgaaggtgcgcggcggcttcccggggatgggc
ggcatgccggggatgcccgccgggatgcccgacctgtcgaacatgccggccggtctcgac
cagctgccccccggtctggacggtttcgacctgtccaaactgaagttcccgaagaagtag
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