Nocardia gipuzkoensis: LTT66_23840
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Entry
LTT66_23840 CDS
T07945
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngp03016
]
LTT66_23840 (truB)
Enzymes [BR:
ngp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LTT66_23840 (truB)
Transfer RNA biogenesis [BR:
ngp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LTT66_23840 (truB)
Prokaryotic type
LTT66_23840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
NAD_binding_3
BF9343_1606-like_C
Motif
Other DBs
NCBI-ProteinID:
UGT66311
LinkDB
All DBs
Position
5257007..5257906
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AA seq
299 aa
AA seq
DB search
MDALGGLLVVDKDGGWTSHDVVARCRKLLRTKKIGHAGTLDPMATGVLVLGVERATKLLG
LLTLTTKAYTATIRLGQATSTDDAEGEVLVTTPAGHLDDADIATRTAELTGDIDQVPATV
SAIKVNGERAYARHRAGEEVQLAARPVTVSRFDVLARRDNGDFVDLDVVVECSSGTYVRA
LARDLGAALGVGGHLTALRRTRVGPFTLEHARTLDELAAAAESGAPPLSLDMDQAVRTAF
PHRDIDAEQADDLRNGRWLDPVGIPDVYAAIDPEGRAIALLRESGKRAASVMVVRPANL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacgcactcggcgggctgctcgtcgtcgacaaggacggtggctggaccagccacgac
gtcgtcgcgcgatgccggaaactgctgcgcaccaagaagatcggtcacgcgggcaccctg
gacccgatggccaccggtgtgctggtgctgggcgtggaacgcgcgaccaaactgctcggc
ctgctcaccctgacgaccaaggcgtacaccgcgaccatccggctcgggcaggccaccagc
accgacgacgccgagggcgaggtgctggtcacgaccccggccgggcacctcgacgacgcg
gacatcgccacgcgcacagccgaactgaccggagacatcgaccaggtgcccgccaccgtg
agcgcgatcaaggtgaacggcgagcgcgcctatgcccgccaccgcgcgggcgaagaagtg
cagttggccgcccgcccggtgacggtgtcgcgcttcgacgtgctcgcccgccgcgacaac
ggcgatttcgtcgacttggacgtggtggtcgagtgctcctcgggcacctacgtgcgggcg
ctggcccgagacctgggtgccgcgctcggcgtcggcggccacctgaccgccttgcgccgc
accagggtcggtcccttcaccctcgagcacgcgcgcaccctggacgagctggccgccgcc
gcggaatcgggcgcgccacccctgagcctcgatatggaccaggccgtgcgcaccgccttc
ccgcaccgcgacatcgacgccgagcaggccgatgacctgcgcaacggacgctggctcgac
ccggtggggataccggacgtctacgccgccatcgacccggagggccgcgcgatcgcgctg
ttgcgggaaagcggcaagcgagcggcatcggtgatggtcgtgcgcccggcgaatctgtag
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