Nocardia gipuzkoensis: LTT66_24600
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Entry
LTT66_24600 CDS
T07945
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ngp
Nocardia gipuzkoensis
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngp03021
]
LTT66_24600
Transcription machinery [BR:
ngp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LTT66_24600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UGT66446
LinkDB
All DBs
Position
complement(5408556..5409524)
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AA seq
322 aa
AA seq
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MTSPATTRVRTSDSDLDAQSPAADLVRVYLNGIGRTALLTAADEVELAKRIEAGLYAQHL
LETGKRLSATRKRDLAIIVRDGQAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNL
GLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREL
HQQLGREATDQELATESGIPVDKISDLLDHSRDPVSLDMPVGNDEEAPLGDFIEDSEATS
AESAVIAGLLHHDVRSVLATLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQI
EREVMSKLRKGERADRLRAYAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccccgccaccactcgtgtgcgcaccagcgattcggacctcgacgctcagagc
cccgccgccgacctggtacgtgtgtacctgaacggaatcggccgcaccgcgctgctcacc
gctgccgacgaggtcgagctggccaagcgcatcgaggcgggcctctacgcgcagcacctg
ctggaaaccggcaagcgactgtcggccacccgcaagcgtgatctcgcgatcatcgtgcgt
gacggtcaggccgcccggtcgcatctgctggaagccaacctgcgccttgttgtctcgctc
gccaagcgttacaccggtcgcggcatgccgctgctcgacctcatccaggagggcaatctc
ggcttgatccgggccatggagaagttcgactacgccaagggcttcaagttctccacgtac
gccacctggtggatccggcaggccatcacccgcggcatggccgaccagagccgcaccatc
cgcctgcccgtccacctcgtggagcaggtgaacaagctcgccaggatcaagcgcgaactg
caccagcagctgggccgggaggccaccgaccaggaactggccaccgaatccggcatcccg
gtcgacaagatctccgatctgctcgaccacagccgtgacccggtgagcctggacatgccg
gtcggcaacgacgaagaggccccgctgggcgatttcatcgaggattccgaggccacgtcg
gccgagtccgcggtcatcgccggtctgctgcaccacgacgtgcgcagcgtgctcgccacc
ctggacgagcgcgaacagcaggtcatccgcctgcggttcggcctggacgacggccagccg
cgcaccttggaccagatcggcaagctcttcggtctctcccgcgagcgggtgcgtcagatc
gagcgtgaagtcatgtcgaagctgcgcaaaggcgagcgggccgaccggctccgcgcctac
gccagctga
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integrated database retrieval system
