Nocardia gipuzkoensis: LTT66_25015
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Entry
LTT66_25015 CDS
T07945
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp00750
Vitamin B6 metabolism
ngp01100
Metabolic pathways
ngp01240
Biosynthesis of cofactors
Module
ngp_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LTT66_25015 (pdxS)
Enzymes [BR:
ngp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LTT66_25015 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
NanE
Dus
IGPS
NMO
DHO_dh
Glu_synthase
TetR_C_27
FMN_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
UGT66518
LinkDB
All DBs
Position
5490689..5491609
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AA seq
306 aa
AA seq
DB search
MLEEFAVTTPENTQTVGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERV
PADIRAQGGVSRMSDPDMIDGIISAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLT
PADYANHIDKWNFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIR
QEIRRLSSLPEDELFVAAKELQAPYELVREIAETGKLPVVLFTAGGIATPADAAMMMQLG
AEGVFVGSGIFKSGNPAQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEEIAQPHR
LAERGW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggagtttgccgtgaccacccccgagaacacccagaccgtcggcaccgcccgc
gtgaagcgcggcatggccgagatgctcaagggtggggtgatcatggacgtcgtcacgccg
gagcaggccaagatcgccgaggacgcgggcgcggtcgcggtgatggcgctggagcgcgtg
cccgcggacatccgggctcagggcggcgtgtcgcggatgagcgacccggacatgatcgac
gggatcatttccgcggtctcgatcccggtcatggccaaggcccgtatcggccacttcgtg
gaggcgcagatcctgcagagcctcggcgtcgactacatcgacgagtccgaggtgctcacc
ccggccgactacgccaaccacatcgacaagtggaacttcaccgtgccgttcgtctgcggc
gccaccaacctgggcgaggcgctgcgccggatcaccgagggcgcggccatgattcgctcc
aagggcgaggcgggcaccggcgacgtgtccaacgcgacgacgcacatgcgcaagatccgc
caggagatccgcaggctctcgtcgctgcccgaggacgagctgttcgtcgcggccaaggag
ctgcaggcgccctacgagctggttcgcgagatcgccgagaccggcaagctgccggtcgtg
ctgttcaccgcgggcggcatcgccacccccgccgacgcggcgatgatgatgcaactcggg
gccgagggcgtgttcgtggggtcgggcatcttcaagtccggcaacccggcccagcgcgcc
gccgccatcgtcaaggccaccaccttctacgacgacccggacgtgctggccaaggtgtcg
cgcggtctgggcgaggccatggtcggcatcaacgtcgaggagatcgcccagccgcatcgc
ctggccgagcgcgggtggtga
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