Nocardia gipuzkoensis: LTT66_26385
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Entry
LTT66_26385 CDS
T07945
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTT66_26385 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_26385 (recC)
Enzymes [BR:
ngp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LTT66_26385 (recC)
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTT66_26385 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UGT66761
LinkDB
All DBs
Position
5762300..5765674
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AA seq
1124 aa
AA seq
DB search
MPLHIHRAERAGVLARALAGVLAQPQEDPFAAEVVAVPAKGVERWLTQTLSGVLGADGSA
DGVCANVAFPSPAALVAEVLAAASGVTPAQDPWAQERAVWTLLRVIDASLDEPWCAVLAR
HLGARATAATAHRVGRRYGTAAQIAALFDSYASQRPALITEWTAGSDTDGAGAAMPEDLL
WQPMLWRGLRAEIGEPSPAERLDAACARLRARPDLVTLPPRLSLFGVTRLPSDQLAVLSA
LAAARDVHLWLVHPSPVLWSALRELPVARTRAEDVSATAVAHPLLAGLARDVRELQQRLA
APAADGSDTYHPIAAARSEDPAPQNDSPPTLLTALQAGIRDDRWPPAPGAVGADGTVQVH
ACHGPARQVEVLRECLLGLFAADPTLEPRDVLIMCPEVEAYAPLVRAAFGQRTSGSPEPQ
ADAEHPAHRLRVRLADRGRGVTNPLLAVIAVLLELADGRVTVTQVLDLAAAETVRRRGGF
DDDDIERLREWAAESGARWGIGQRQRQAFGLADFAQNTLNSAVDRILLGVTAGETSDDWL
DLALPLDDVDSNDVDLAGRFAEFIDRLAVCLRDLRGPRPAHEWAAALGRALDLLTDVPDA
QAWVRTEARQELAAATGHAGEVPLRLTDVGVLLRARLAARPTRANFRTGELTVCTMVPMR
SVPHRVVVLLGLDDEVFPRASAADGDDVLAREPLLGERDPRSEDRQLLLDAILAARDTLL
MFHTGADPVSGAHRPPAIPVAEVLDALRAHVGAAAMRAVVTRHPLQSFDRRNFRAEQPFS
FDTVALAGAYAADGPARPRPDFLAAPLPAAEAADVALADLIAFAEHPVRAFLWQRLGLRV
PEHDEDIADRLPIELDGLAKWELGERLLTARLTSADPAGLRAAEWRRGTLPPFGFGAAVL
DEVEHTVDRLVRAAQADYAGQARAVDIAVDLGNGRRLSGTVPEVRGETLVRTTFSRLAPK
HRIGAWVSLLALTVTEDRSWRAVSTGRGQFGRPTWRCELTAPDVPVARQILRELVVLRDA
GLTEPLPVAPTASAIYAERRFRGAGTDDAIAAAEREFNGGPNGPGPFGDHTDRHLRYVWG
PAPRLENLMAAPAPAGEPGESTRFGALARRMWAPLLAAESQGQP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcacatccaccgtgccgagcgcgccggcgttctcgcccgggcgctggcgggg
gtgctggcccagccgcaggaagacccgttcgcggccgaggtggtggcggtaccggcgaaa
ggcgtggagcgctggctgacgcagacgctctccggtgtgctcggcgcggacggctcggcc
gacggcgtgtgcgccaatgtcgcttttccctcgcctgccgcgctggtcgccgaggtcctg
gccgcggcgagcggcgtgacacccgcgcaggatccgtgggcgcaggagcgggcggtgtgg
acgctgctgcgggtgatcgatgcgtcgctggacgagccgtggtgcgcggtgctggccagg
cacctcggcgcgcgggccaccgcggccaccgcgcaccgcgtcggccggcgctacgggacc
gctgcccagatcgccgcgctgttcgacagctacgcgtcccaacggcccgcgctgatcacc
gagtggacggcgggttcggacaccgacggtgcgggcgccgcgatgcccgaggacctgctc
tggcagccgatgctatggcgcgggctgcgcgccgagatcggggagccgagcccggccgaa
cggctcgacgccgcctgcgcgcggctgcgcgcgcggccggatctggtcacgctgccgccg
cggttgtcgctgttcggcgtgaccagattgcccagcgaccaactcgccgtgctgtcggcg
ctggccgccgcccgcgacgtgcatctgtggctcgtccatccgagcccggtgctctggtcg
gccctgcgggagctgcccgtggcccgtacgcgcgccgaggacgtgagcgccacggcggtc
gcgcacccgctgctggcgggactggcccgcgacgtccgggaactccagcagcggctcgcc
gcacccgccgccgacggctccgatacctatcatccgattgccgcggctcgatccgaagac
cctgcgccgcagaacgattcacctccgacgttgctgacggcgctgcaggcgggtattcgg
gacgatcggtggccgcccgcgccgggggcggtcggcgccgacggcaccgtgcaggtgcac
gcgtgtcacggcccggcgcgacaggtcgaggtgctgcgggaatgcctgctcgggctgttc
gcggccgacccgacgctggaaccgcgtgacgtgctgatcatgtgccctgaggtggaggcg
tacgcgccgctggtgcgcgcggcgttcgggcagcgcacctcgggatcgcccgagccgcag
gccgacgcggagcatccggcgcaccggttgcgggtgcgcctggccgaccgggggcgcggg
gtgaccaatccgctgctcgcggtgatcgcggtactgctcgagctggccgacggccgggtg
acggtcactcaggtgctcgatctcgccgccgccgaaaccgtccggcggcgtggcggattc
gacgacgacgacatcgagaggctgcgtgaatgggccgccgagtccggcgcgcggtggggg
atcgggcagcgtcagcgccaggcgttcgggctcgccgatttcgcgcagaacacgctcaac
agcgcggtggaccggatcctgctcggcgtcaccgcgggcgagacctccgacgactggctg
gatctcgcgctgcccttggacgacgtggacagcaacgacgtcgacctggccggacgcttc
gcggagttcatcgatcggctcgcggtctgcctgcgcgacctgcgcgggccccggcccgcg
cacgagtgggcggcggcgctgggccgcgcgctcgatctgctgaccgacgtacccgacgcg
caggcctgggtgcgcaccgaggccaggcaggaactggccgccgccaccgggcacgcgggc
gaggtgccgttgcggctgaccgatgtgggcgtcctgctgcgtgcacggctggcggcgcgc
cccaccagggccaacttccgcaccggtgagctgaccgtctgcacgatggtgccgatgcgg
tcggtgccgcaccgggtggtcgtgttgctcggactggacgacgaggtgtttccgcgcgcg
agcgccgcggacggcgacgacgtgttggctcgcgaacccctgctgggcgaacgggatccg
cgcagcgaggaccggcaactgctgctggatgcgattctcgcggcccgggatacgctgctg
atgttccacaccggcgccgatccggtgagcggggcgcaccggcctcccgccattccggtc
gccgaggtgctggacgcgctgcgggcgcacgtcggcgccgcggcgatgcgcgcggtggtg
acgcggcatccgctgcagtcgttcgaccgccggaacttccgcgccgagcagccgttcagc
ttcgacacggtggccttggccggcgcgtacgcggccgacgggcccgcgcggccgcgtccc
gatttcctggccgcgccgctgcccgccgcggaagcggcggatgtcgcgctggccgacctg
atcgcgttcgcggagcatccggtgcgcgcgttcctgtggcagcgtctgggtctgcgggtc
cccgagcacgacgaggacatcgccgaccggctgcccatcgagctcgacggcctggccaag
tgggagctgggcgaacgcctgctcaccgcccgcctgaccagcgcggacccggccgggctg
cgggcggcggaatggcggcgcggcacgttgccgccgttcgggttcggcgccgccgtgctc
gacgaggtcgagcacaccgtggaccggttggtgcgcgcggcgcaggcggactacgcgggc
caggcccgcgcggtggacatcgcggtagatctcggcaacgggcgcaggctcagcggcacc
gtgcccgaggtgcgtggcgaaaccctggttcgcaccaccttttcccggctggctcccaaa
caccgtatcggagcatgggtctcgctgctggcgctgaccgtcaccgaggaccgctcctgg
cgggcggtgagcaccggtcgcggccaattcggccgccccacctggcgttgcgaactcacc
gcgcccgacgtgccggtcgccaggcagatcctgcgtgaactcgtcgtgttgcgcgacgcg
ggcctgaccgaaccgctgcccgtggcgcccaccgccagcgcgatctacgccgagcgccgt
ttccgcggcgcgggcaccgacgacgcgatcgccgcggcggagcgcgaattcaacggcgga
cccaacggcccgggacccttcggcgatcacaccgaccgccacctgcgctacgtctggggt
ccggcgccccggctcgagaacctcatggccgcgcccgctccggcgggcgagcccggtgag
agcacccgcttcggcgcgctggcccggcggatgtgggctccgctgctggccgcggaaagc
cagggccagccgtga
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