Nocardia gipuzkoensis: LTT66_26390
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Entry
LTT66_26390 CDS
T07945
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ngp
Nocardia gipuzkoensis
Pathway
ngp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTT66_26390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngp03400
]
LTT66_26390
Enzymes [BR:
ngp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LTT66_26390
DNA repair and recombination proteins [BR:
ngp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTT66_26390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UGT66762
LinkDB
All DBs
Position
5765904..5769305
Genome browser
AA seq
1133 aa
AA seq
DB search
MTVQETSFPASGFDAAAFEPNGPLPTGTTVLEASAGTGKTHAIVGLAVRYVAEAGIDVSE
LLLVTFSRAATQELRERTRDRFVAVAAGLADPAAARAHADELVRYLAQADEDEVRLRQRR
LLTALSDFDAGTIATTHSFCQRMLDELGLAGEHDPGARLVETVDDLVGTVVDDLYLHRYA
RAEPPFSLKEARTLALAAVRDRHAALVPDGESGAGERVAFAHAVRAETERRKRLAGLRDF
DDLLVLLHDVLADPEHGPRACLRIRARYRVALVDEFQDTDPLQWDILRRSFHGHATLVLV
GDPKQAIYAFRGAEVLSYLDAVAHADTRRELTTNWRSDAGLLAALDHLHGGAALGHEEIR
VYPVAPTRPWSRLSGPGELTTPMRVRCLPRTGAGPLNKSGFPAVGRMRAKVADDLAADIV
HLLESGVLLDGKAEITAAEGDSAPDRPVDAARRPIGPGDIAVLVRTRSQIDVVRAALDRV
GVASVLAGGVSVFATSSATDWLWVLRALEQPHRGDRVRLAACTPLLGVTAAEIDSGGADL
VGRISAQLREAARLFTRAGFAAVFEKLSAETGLAQRLLAVENGERQLTDLRHIAQLLDQV
ALAEGLGLTALTRWLADRVRDPASGAVADRSRRLDRDAAAVQIATVHASKGLEFPVVYLP
FAWDSAKNPYPATLLFHADDGARVLDVGGPDAPGYAERKARSEAEEAGEELRLLYVALTR
AMCQIVAWWAPAITTAASPLHRMVFGRADGGSVVATRAPVAADTVAAQSLSAWAQDAAAA
ISVTAVAGTDDVAVRRVRTAAAQGALAAARFDRVLDQQWRRTSYSALTASAHEAVVPESG
SEPEDPGELGDEPAGTSLIGAAEPQETSAASLMNALPYGAEFGTLVHGVLERIDTGRVDL
AAEVHDRCREAVDELMADMDPDVLATALLAVLRTPLEGGCLADISPRDRLSELEFELPLA
GGEHAGATAATLRRIADLLRAHLPADDDLSMYADQLAALEDIPLRGYLTGSIDAVLRVDG
GAGPRFVVVDYKTNRLGAGDLTVAHYTRDRMAAEMLRSHYPLQALLYSVALHRYLRWRLP
GYDPAQHLGGVRYLFVRGMIGPQTPAGCGVFDWYPPADLVVALSALLAGEAAR
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcaggaaacctccttcccggcaagcggcttcgacgccgccgcgttcgagccg
aacgggcccttgcccaccggcacgaccgtgctggaggccagcgcgggcaccggcaagacg
cacgcgatcgtcggtctcgccgtgcgctacgtcgcggaggccggcatcgatgtctccgag
ctgctgctggtgacgttcagccgggcggcgacccaagagctacgggaacgcacccgcgac
cgattcgtcgccgtcgccgccggattggccgatccggcagcggcgcgtgcgcatgccgac
gaactggtgcggtatctcgcgcaggccgacgaggacgaggtaaggctgcggcagcggcgg
ctgctgacggcactgtcggatttcgacgcgggcaccatcgccaccacgcacagcttctgt
cagcgcatgctcgacgaactcgggctcgccggtgaacacgatcccggcgcccggctggtg
gagaccgtcgacgacctcgtcggcaccgtcgtcgacgacctgtatctgcatcgctatgcc
cgcgccgaaccgccgttctcgctgaaagaggcccgcacgctcgcgctggccgccgtgcgg
gaccggcacgcggcgctcgtgcccgacggcgaatccggcgcgggggagcgggtggcgttc
gcgcatgcggtgcgcgcggagaccgagcgccgcaaacggctggccgggctgcgcgacttc
gacgacctgctggtgctgctgcacgacgtgctcgccgatccggagcacggcccgcgcgcc
tgcctgcgcatccgcgcgcgctaccgggtagccctggtcgacgagttccaggacaccgac
cccttgcaatgggacatcctgcgcaggtccttccacggacacgccaccctggtgctggtc
ggtgatcccaagcaggcgatctacgccttccgcggcgcggaagtgctcagctacctcgac
gccgtcgcgcacgccgacacccgcagggagctcaccacgaattggcgcagcgacgcggga
ctgctcgcggcgctggaccacctgcacggcggcgcggcgttgggccacgaggagatccgc
gtctacccggtcgccccgaccaggccgtggtcgcggctgtccggccccggcgaactcacc
actccgatgcgtgtccgatgcctgccgcgcaccggcgccgggccgctgaacaaatccggt
ttcccggccgtcggccggatgcgggccaaggtcgccgacgatctcgccgccgacatcgtc
cacttgctcgaatccggggtgctgctggacggcaaggccgaaatcactgccgccgaaggc
gattcggctccggaccggccggtggacgcggcacgcagaccgatcggccccggcgacatc
gcggtgctggtgcgaacccgctcgcagatcgacgtggtccgcgcggcgctggatcgcgtc
ggcgtcgcttccgtgctcgccggcggcgtcagcgtcttcgcgaccagcagcgccaccgat
tggctgtgggtgctgcgggcgctggaacagccacaccgcggcgaccgcgtgcggctggcc
gcgtgcacaccgctgcttggcgtcaccgcggccgagatcgacagcgggggcgccgatctg
gtcggccggatcagcgcccaattgcgcgaggcggcgcggctgttcacccgcgcgggattc
gcggccgtcttcgagaagctctcggccgaaacgggactggcgcagcggctgctcgccgtg
gagaacggggaacggcagctcaccgacctacggcacatcgcgcagctgctcgaccaggtc
gcgctcgccgagggcctcgggctgaccgcgctgacccggtggctggccgaccgggtacgc
gaccccgcctccggcgccgtcgccgatcgcagccgcaggctcgaccgggacgccgcggcc
gtgcagatcgccaccgtgcatgccagcaagggactcgaattcccggtcgtctacctgccc
ttcgcctgggacagcgcgaagaacccctatccggcgacgttgctgttccacgccgacgac
ggggcgcgcgtgctggacgtcggtggaccggatgcaccgggatacgccgaacgcaaggca
cgcagcgaagccgaggaggcgggggaggagctgcgcctgctgtacgtggcgctgacccgg
gcgatgtgccagatcgtcgcctggtgggcgcccgcgatcaccaccgcggcgtcgccgctg
caccggatggtcttcgggcgggccgatggtggctccgtcgtcgccacgcgtgcgccggtc
gccgcggacaccgttgccgcccagtcgctttcggcgtgggcgcaggacgcggccgcggcg
atctcggtgacggcggtggccggaaccgacgatgtagccgtccggcgggtgcgcaccgcg
gcggcgcagggcgcactggccgccgcccgattcgaccgggtgctggatcagcagtggcgg
cgcacgtcgtactcggccctgaccgcgtcggcgcacgaagcggtcgtacccgaatccggc
agcgaacctgaggatcccggagagctgggcgacgagcccgccggtacttccctgatcggc
gcggcggaaccgcaggagacgagcgcggcctcgctgatgaacgcgctaccttacggcgcg
gagttcggcacgctggtgcacggcgtcctggagcggatcgacaccggccgtgtggatctg
gcggccgaggtacacgaccggtgccgcgaggcggtggacgagctgatggccgacatggac
ccggacgtgctggccaccgcgctgctcgcggtgctgcgtaccccactcgagggcggctgc
ctggccgacatctcgccccgcgaccggctcagcgagctcgagttcgaactgccactggcg
ggcggggaacacgccggcgccaccgcggcgaccttgcgccgcatcgctgacctgctgcgt
gcgcacctcccggcggacgacgatctgtccatgtacgccgaccagctggcggcgttggag
gacataccgctgcgcgggtacctgaccggcagcatcgacgcggtgctgcgcgtcgacggc
ggcgcgggcccgcgattcgtggtcgtcgactacaagaccaatcggctgggcgccggcgat
ctcaccgtcgcgcactacacccgcgaccgcatggccgccgagatgctgcgttcgcactat
ccgctgcaagcgctgctgtattcggttgcgctgcaccggtatctgcgctggcggctgccc
ggttacgaccccgcccagcatctcggcggagttcggtacctgttcgtgcgcggcatgatc
ggaccgcagacaccggcggggtgcggcgtcttcgactggtatccgcccgccgatctggtc
gtcgcgctctccgcgctgctggccggggaggccgcgcggtga
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