Nocardia gipuzkoensis: LTT66_33205
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Entry
LTT66_33205 CDS
T07945
Name
(GenBank) relaxase domain-containing protein
Organism
ngp
Nocardia gipuzkoensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Y2_Tnp
ResIII
AAA_22
DUF6657
Motif
Other DBs
NCBI-ProteinID:
UGT72395
LinkDB
All DBs
Position
complement(7266770..7271524)
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AA seq
1584 aa
AA seq
DB search
MSLAKLGSGDGYTYYLRSIATQDVNDRGPQDLSTYYSERGESPGRWLGSGLPNVGIEVGE
VVTEAQMRALFGRGMHPNAEAMIAAEVEARAVEGISRRTARAHAVRLVRLGAPFTKHAVA
EYSYRYERARAYAAYNAEHGRVDYAPIPAEERSRIATDVAGRMFAEEYGRPPRDDRELSG
WVARASRAPSKRVAGFDLTFSPVKSVSTLWALAPREVSEKIEAAVDAALRDALAYLEEHA
VFTRVGRHSRRQVDVVGGLIATAFQHRDSRAGDPNLHVHVVISNAVKRHDGQWGALDGRM
IYQHNVAASELFNTRLEHYLEQSLNVQFAERHSSNRRRRGKRPVREIVGVQERLAEEWSK
RSAAVDTELTIRTTQFQAERGREPTPGELHDLAQEATLKTRGHKVAARSRAEQRVDWRRD
AVQLLGGESAVDAMVASALGQPVPQREATDAAWVAATAARVVEVVSDSRATWQFRHIRAE
ATRQLRGSINPVDWHTLITQVTDTALSEPRSIPRGTPEAEDIAPTVEALIRRDGSSVFTT
SGSQLFTSPQILAAEERLIAASLLEGGRTIAAAAVDAAIIEHAANNNGQMLNDGQVQLLR
EFATSGRRLHIAIAPAGTGKTTAMAALVRAWTAEGGTVLGLAPEGPAAGVLGSEIGAESK
TVDMLVTVINDLRSGERALDDAPDWVRTIGPRTVVVLDEAAKTPTLKLDSAVSWLIERGA
SVRAVGDDRQLSSVQAGGVIRDIVHHAGAATLTSVVRFDNPSERAASLALRHGDTAAIAF
YTDHGRVHVGTLGAVVHAAYRAWRVDYAQGRDVALLAPTNELVRQLNALARDERLRREGL
HGPETLLSDGLTASVGDIITTRENNYRLRISQTDHVRNGYRWKVRAVYPDGRITATHIGS
GRKVTLPTAYVRECVELGYARTINSAQGLTTDTCHGVLTGSEDCFQLYVLATRARGGGHL
YLATAGDGQDAPAETWNALHPPTAIDLLTQILGRDGGQVSATTQARQAADPQRQFAGVVD
AYLEALGAAADAVLGDEHHAAVTAAAERLMPGLTDEDAWPVLRQHLAMIALAGRDPITTL
TDAITARELDTADDKAAVLVWRVGRNTAGSGPLGWVPEVPPVLRDDPDFGAHLRERTAQM
LNLSSQIRTTARAWTPETAPVWARQLAGHDPNLTAALAIWRASHAIGDHDRRPTGLVQQP
VDERRTQLELDSAVRSRLGDLDADTRRWTPIAREVDARIPADPYWPQLAEELSHAADTGL
DVPTAVRTAAAQRPLPDEQPAAALHWRLVETLDDAQRRDADQVARAVSELRVDQWRRMSD
RELEDEIQSARRDFDLDPILDMGLIIERSQRYERGSDADAVRRAHAELDQHAAAIRTARH
AQAAVVTAEHALTLAHRQQATAQNNPPKTPWWRTNTASARTARAEHAARLEYLRQALNNA
EQDLLAARETARRTRAAVPLAHDTWDATLHRADNHAARAAELAAADHSDNAFARKLAQAE
QRWLREERQLDDAFTEQQRRTQLTPRQRDLEDRARRHLDLNTHHGPVSAQPTASTENGAS
RNEPFDTPETDTNYVYSYDYDYGL
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggcgaagctcggcagtggcgacggctacacctattacctccgctcgatcgcc
acgcaggacgtgaatgatcgcggtccgcaggacctttcgacctactacagcgagcgcggc
gaatccccgggacgctggctgggttccggtctgccgaacgtcggtatcgaggtcggtgag
gtggtgaccgaagcgcagatgcgggcgttgttcggtcgcggtatgcatccgaacgccgag
gcgatgatcgccgccgaagtagaggcccgcgctgtggagggcatctcgcgccgtaccgcg
cgggcgcacgcggtacggctggtccggctgggtgctccgttcacgaaacacgcggtggcg
gagtattcctaccgctacgagcgggcccgcgcctatgccgcctacaacgccgagcacggc
cgcgtcgactacgccccgatccccgcggaggagcgcagccgcatcgccaccgatgtggcg
gggcgcatgttcgccgaggaatacggtcgcccaccccgcgacgacagggagctgtcgggc
tgggtggctcgcgccagccgagcgccctcgaagcgggtcgccggattcgacctcacgttc
tcgccggtcaagtcggtgtcgacgttgtgggcgctggccccacgtgaagtgtcggaaaag
atcgaggccgccgtcgatgccgccctacgcgacgcgctggcctatctcgaggagcacgcg
gtgttcacccgggtcgggcggcacagccgccgccaagtcgacgtcgtcggcggcctgatc
gccaccgccttccagcaccgtgactcccgtgccggtgacccgaatctgcacgtccacgta
gtgatctcgaatgcggtcaaacgccacgacggacagtggggtgcactcgacggcaggatg
atctaccagcacaacgtcgccgcctccgagctgttcaacacccggctggagcactacctc
gaacagtcgctcaacgtgcagttcgccgaacgccacagcagcaaccgacgccggcgcggg
aagcgaccagtacgggagatcgtcggcgtccaggagcgcctggccgaggaatggtcgaag
cgatcggccgccgtggacaccgagctgaccatacgcaccacgcagtttcaagccgagcgt
ggccgcgaacccacaccgggtgagctgcacgacctcgcccaagaagccaccttgaaaacc
cgcggccacaaggtggcggcacgttcgcgtgctgagcaacgcgttgattggcgacgtgat
gccgtgcagctgctgggtggtgagagcgcggtcgatgcgatggtcgcgagcgccctggga
cagccggtcccgcagcgggaggccaccgacgccgcgtgggtcgccgcgaccgccgcacgg
gtcgtcgaggtggtctccgattcccgggcgacctggcagttccgccacattcgcgccgaa
gccacccgccagctgcgcggcagcatcaacccagtcgactggcacaccctcatcacccag
gtcaccgacactgccttgagcgagccgcggtcgatcccccgcggcacaccggaggccgag
gacatcgcacccaccgtcgaggctttgatccgccgcgacggaagcagcgtgttcacgacc
tccggctcccagctcttcaccagcccgcagatcctcgctgccgaggaacgactgatcgcg
gcgagcctgctcgaaggcgggcgcactatcgcggcggccgcggtggatgccgcgatcatc
gagcacgccgccaacaataacggccagatgctcaacgacggccaggtacagctgctgcgc
gagttcgccacctccggacgacggctacacatcgccatcgccccagccggcaccggtaag
accaccgccatggccgcgctggtgcgcgcctggaccgccgaaggcggcaccgtgctcggg
ctggcaccggaaggaccggccgccggcgtcctcggcagcgagatcggtgcggagtccaag
accgtggacatgctcgtcacggtgatcaacgacctccgctccggcgagcgggccctcgac
gacgcaccggactgggtgcgaacgatcggaccccgcaccgtggtcgtactggacgaggcc
gcgaaaacacctactctcaaactggattcggccgtgtcctggctgatcgaacgcggagcg
agcgtgcgggcggtcggtgatgaccggcaactgtcttccgtgcaagccgggggcgtgatc
cgcgacatcgtccaccacgccggagccgccaccctcaccagcgtcgtccgcttcgacaac
cccagcgagcgcgccgccagcctcgccctacgccacggtgatacggccgcgatcgcgttc
tacaccgaccacggccgcgtccacgtcggcaccctcggcgccgtggtgcacgccgcgtac
cgggcgtggcgggtcgactacgcccaaggccgcgacgtcgcgctgctggcgccgaccaac
gaactggtgcgccagctcaacgccctcgcccgagacgaacgcctccgccgcgaaggcttg
cacggaccggaaacgctgctgtcggacgggcttacggcttcggtcggggacatcatcacg
accagggagaacaactatcggctgcggatctcgcaaaccgatcacgtccgcaacggctac
cgctggaaggtccgtgccgtctacccggacgggcggatcaccgctacccacatcggatcc
ggccgcaaagtcaccctgcccaccgcttacgtgcgtgaatgcgtcgaactcggctacgcc
cgcacgatcaactccgcgcaaggcctgaccaccgacacctgccacggcgtgctgaccggc
agcgaggactgcttccaactgtatgtgctggccacccgcgcccgcggcggcggacacctc
tacctcgccaccgcaggcgacggccaggacgcacccgccgagacgtggaacgcgctgcac
ccaccgaccgcgatcgacctgctcacccagatcctcggccgcgacggcggccaagtctcc
gcgaccacccaggcccgccaagccgccgacccccaacgccagttcgccggagtcgtcgac
gcctacctcgaggcgcttggcgcggccgccgacgcagtgctcggcgacgagcaccacgcc
gccgtcaccgcggccgccgaacgcttgatgcccggtctcaccgatgaggatgcatggcca
gtgctgcgccagcacctggccatgatcgccctggccgggcgcgacccgataacgacgctc
accgacgccatcaccgcgcgggaactcgacaccgccgacgacaaagccgccgtgctggtg
tggcgcgtcggccgcaacaccgccggttccggtccgctggggtgggtgcccgaagtcccg
cctgtgctgcgcgacgatccggacttcggcgcccacctgcgggaacgcaccgcgcagatg
ctgaatctgtccagccagatccgcaccaccgcccgcgcctggacacccgagaccgcgccg
gtgtgggcgcggcaactggccgggcacgaccccaacctcactgccgcactcgcgatctgg
cgagccagccacgcgatcggcgaccacgaccgacgcccgaccgggctcgtacagcagccg
gtcgacgaacgccgcacccagctcgagctggactccgcggtgcgctcccgtctcggagac
ctcgacgccgacacccgccgatggacacctatcgcccgggaagtcgacgcccggatcccc
gccgacccgtactggccacaactggccgaggaactgtcccacgccgcggacaccggactc
gacgtaccgaccgccgtccgcaccgccgccgcgcagcgcccgctaccggacgaacagccc
gccgccgcgctgcactggcgactggttgaaacgctcgacgacgcgcagcgccgcgacgcc
gaccaagtcgcccgcgcggtctctgaactccgggtcgaccagtggcgccgcatgagcgat
agggaactagaagacgagatccaatctgctcggcgcgatttcgatctcgacccgatcctg
gacatgggtctcatcatcgaacgtagccagcgatacgagcgcggcagcgacgccgacgct
gtacgccgcgctcacgccgaactcgatcaacacgcggcagcgatccgcaccgcccgccac
gcacaggctgcagtcgtgaccgccgaacacgccctcaccctcgctcaccggcaacaagcg
accgcacagaacaacccgccaaagaccccctggtggcgcaccaacaccgcctccgcacgc
accgcacgcgcggagcacgctgcccgcctcgagtacctacgccaagccctcaacaatgcc
gaacaagacctgcttgccgcccgcgagaccgcccgccgcacccgtgccgcagtgcccctc
gcgcacgacacctgggacgcgacgcttcaccgcgctgacaaccacgccgcgcgcgccgcc
gagctggccgccgcagaccacagcgacaacgccttcgcacgcaaactggctcaggcagaa
caacgctggcttcgcgaggaacgccaactcgacgacgcgttcaccgaacaacagcgccgc
acgcagctgacaccgcggcaacgcgacctcgaagaccgggctcgccgccatctcgacctc
aatacgcaccacggaccggtctctgcgcaaccaacagcttccaccgagaacggggcgagc
cgcaatgagcccttcgacactccggaaacagacactaactacgtgtacagctacgactac
gactacggactgtag
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