Nocardia gipuzkoensis: LTT66_36515
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Entry
LTT66_36515 CDS
T07945
Name
(GenBank) HAMP domain-containing protein
Organism
ngp
Nocardia gipuzkoensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
GAF_2
HisKA
GAF
GAF_3
Laminin_II
CovS-like_HAMP
OmpH
ATG14
Motif
Other DBs
NCBI-ProteinID:
UGT68571
LinkDB
All DBs
Position
8011964..8016496
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AA seq
1510 aa
AA seq
DB search
MTDTAASARTASEQAVTAAGQVELRQLLAGLTAVRDGDFGTRLPTDADGLLGEIATVFNG
MVDQLSLFTSEVTRVAREVGTDGRLGGQAEVPGVSGTWKDLTDSVNAMAGNLTSQVRDIA
QVATAVARGDLSQKIDVDARGEILELKNTVNTMVDQLSAFADEVTRVAREVGSEGRLGGQ
AEVPGVGGVWRDLTASVNFMAGNLTDQVRNIAQVTTAVARGDLSQKITVSARGEILELKN
TINTMVDQLSSFADEVTRVSREVGTEGILGGQADVKGVSGTWRDLTDSVNFMAGNLTAQV
RSIAQVATAVAQGDLSQKIRVDARGEILELKNTINTMVDQLSAFADEVTRVAREVGTEGR
LGGQADVKGVSGTWKDLTESVNVMADNLTAQVRSIAQVTTAVARGDLSQKIRVDARGEIL
ELKETINTMVDQLSAFADEVTRVAREVGTEGNLGGQATVRGVSGTWKDLTDNVNVMASNL
TGQVRSIAQVATAVARGDLSQKITVEAKGEVAALAGVINTMVDTLSAFADEVTRVAREVG
TEGMLGGQARVPNVAGTWKDLTDNVNSMANNLTNQVRNIAQVTTAVAQGDLTRKIDVDAR
GEILELKTTINTMVDQLSAFAAEVTRVAREVGSEGRLGGQAEVEGVSGTWKRLTENVNEL
AGNLTRQVRAIAAVTSAVAEGDLTRSITVEASGEVAELKDNINAMVESLRETTMANQDQD
WLKTNLARISGLMQGQRDLHVVAGLIMDELAPLVSAQFGAFYLADDSDERPELRLISSYG
SPEEPGRPSRFAFGQSLVGQAARSRRTIAVDDVPGDYLTISSGLGQTAPVNLLMLPIVVE
DQVLGVIELATLHRFTRIHRDFLDQLMETVGVNVNTIIANARTDELLVESQRLTTELQAR
SEELQVQQEELQRSNAELEDKAALLAMQNRDIEAKNLQIEQARQELETRAQQLALASKYK
SEFLANMSHELRTPLNSLLILAQLLAQNPSRNLTPKQVEYAGIIHSAGSDLLQLINDILD
LSKVEAGKMDLTPERVSLRQLLDYVEATFRPMTTQKSLRFRVTTAPGLPLDLLTDDSRLR
QVLRNLLSNAVKFTETGSVQLRIEPAEASELPAAVRQHGPAVAFRVIDSGIGIAEHQLES
IFGAFQQADGTTSRKYGGTGLGLSISREIAYLLGGAITAESALGRGSTFTLYLPVARPDF
QEAPPREREDAQQADSRPEHTPAPTTPQQHRRLLVVEERPQGLLSLVAQSAVAELADSND
PRGPVQVVTTVGVEEAAAAMAAEAFHCVVLELDMPDSAALRFLETMDGDAALRSVPVLVH
NRRLDAEQERLLLQRSTRQPLELLSSLDDLRERIALHVTAEAPGDMLPLVRREDPPAAAP
QRLDGKLAGRTVLIIDDDARNLFALSSILELHGVSVLHAEDGREGIDKLLAHPETDLVLM
DVMMPEMDGYTATATIREMPQYESLPIIAVTAKAMLGDREKSLAAGANDYVTKPVDADAL
LACIQHWLAV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacggcggcatctgcccgcaccgcatccgagcaggctgtcacggccgcgggc
caggtcgagctgcgccagctgctggccgggttgacggccgtgcgcgacggtgatttcggc
acccgcttaccgaccgacgccgacgggctgctcggcgagatcgcgacggtgttcaacggc
atggtggaccagctgtcgctgttcacctccgaggtcacccgggtcgcgcgcgaggtcggt
acggacgggcggctcggcggtcaagccgaggtgcccggcgtgtccggtacctggaaggac
ctcaccgattcggtgaacgcgatggcgggcaacctgaccagccaggtgcgcgatatcgcc
caggtcgcgacggccgtggcgcggggcgacctgtcccagaagatcgacgtggacgcccgc
ggcgagatcttggagttgaagaacaccgtcaacacgatggtcgaccagctgtccgcgttc
gcggacgaggtcacccgggtggcgcgcgaagtgggttcggaaggccggctgggcggtcag
gcggaggtgcccggcgtcggcggcgtatggcgcgacctcaccgcctcggtgaacttcatg
gcgggcaacctgaccgaccaggtccgcaacatcgcccaggtgacgaccgcggtggcgcgg
ggcgacctgagccagaagatcacggtgagcgcccgcggcgagattctggagttgaagaac
accatcaacacgatggtcgaccagctctcgtccttcgccgacgaggtcacccgggtctcg
cgcgaggtgggcacggagggcatcctcggtggccaggcggacgtcaagggggtctccggt
acgtggcgggacctcaccgactcggtgaacttcatggcaggcaacctgaccgcgcaggtg
cggtcgatcgcccaggtggcgaccgcggtggcgcagggcgatctgtcccagaagatccgg
gtggacgcgcgtggcgagattctggagctgaagaacaccatcaacacgatggtcgaccag
ctctcggcgttcgccgacgaggtcacccgcgtcgcccgcgaagtgggcaccgaagggagg
ctgggcggtcaggcggacgtcaagggcgtctccggcacctggaaggacctcaccgagtcg
gtcaacgtcatggccgacaacctcaccgcgcaggtgcgttcgatcgcgcaggtcaccacc
gcggtggcccggggcgatctgagccagaagatcagggtggacgcgcgcggtgagatcttg
gagctcaaggagaccatcaacacgatggtcgatcagctctcggcgttcgccgacgaggtc
acccgcgtcgccagggaggtcggcaccgagggcaacctcggcggccaggcgacggtgcgg
ggcgtgtcgggcacctggaaggacctgaccgacaacgtcaatgtcatggcttccaacctg
accggccaggtgcggtcgatcgcacaggtcgccacggcggtggcgcgcggcgatctgagc
cagaagatcaccgtggaggcgaagggcgaggtcgcggcgctcgccggggtgatcaacacg
atggtcgacacgctgtccgcgttcgccgacgaggtcacccgcgtcgccagggaggtcggc
accgaggggatgctcggcggccaggcccgcgtgccgaatgtggcgggcacgtggaaggac
ctgaccgacaacgtcaactccatggcgaacaacctgaccaaccaggtccgcaacatcgct
caggtcaccaccgcggtggcacagggcgatctgacccgcaagatcgacgtggacgcccgc
ggcgagatcctcgagttgaagaccacgatcaacacgatggtcgaccagctttccgcgttc
gcggccgaggtgacccgggtcgcccgcgaggtggggtcggagggccggctgggcgggcag
gccgaggtcgagggcgtctcgggcacgtggaagcggctgaccgagaacgtcaacgagctg
gcgggcaacctgacccgccaggttcgcgcgatcgccgcggtcaccagcgccgtggccgag
ggcgatctgacccgctccatcaccgtggaggcctccggcgaggtcgcggagctgaaggac
aacatcaacgcgatggtggagtcgctgcgtgagaccaccatggccaaccaggatcaggat
tggctgaagaccaatctggcccgcatctccggtctcatgcaggggcagcgagacctgcat
gtggtggccgggctgatcatggacgagctggcgccgttggtttccgcgcagttcggcgcg
ttctatctcgccgacgacagcgacgagcggccggagctgcggctgatcagctcctacggc
agcccggaggaacccggccgcccgtcgcggttcgccttcggccagtccctggtgggccag
gccgcgcgcagccgtcgcacgatcgcggtggacgacgtgcccggcgactacctcaccatc
tcctccgggctggggcagaccgcgccggtcaacctgctcatgctgccgatcgtggtggag
gatcaggtcctcggtgtgatcgagctggccacgctgcaccgtttcacccgcatccaccgg
gacttcctcgaccagctgatggagacggtgggtgtcaacgtcaacaccatcatcgccaac
gcccgcaccgacgagctgctggtcgagtcccagcgcctgaccaccgaactgcaagcccgt
tcggaggagttgcaggtgcagcaggaggagctgcaacgatccaacgccgaactggaggac
aaggcggcgctgctggccatgcagaaccgcgacatcgaggccaagaacctccagatcgag
caggccaggcaggaactggagactcgcgcccagcagctcgcgctcgcgtcgaagtacaag
tcggaattcctggccaatatgagccacgagctgcgcacaccgctgaacagtctgctgatc
ctggcgcagctgctggcccagaacccgagccgcaacctcacgcccaagcaggtcgagtac
gcgggcatcattcactcggcgggctcggatttgctgcagctgatcaacgacatcctcgac
ctgtccaaagtggaggcgggcaagatggacctcacgcccgagcgtgtgtcgttgcgtcag
ctgctggactacgtcgaggccaccttccggccgatgaccacccagaagagccttcgcttc
cgcgtcacgaccgcgccgggcctgccgttggacctgctcaccgacgactcgcggctgcgg
caggtgctgcggaatctgctgtccaacgcggtgaagttcaccgagaccggctcggtgcag
ctgcggatcgagccggcggaggcgagcgagctgcccgccgctgtgcgccagcacggcccg
gccgtcgcgttccgggtgatcgacagcggtatcggcatcgccgaacaccagctcgagtcg
attttcggcgcgttccagcaggccgacggcacgaccagccgcaagtacggcggcaccggc
ctcggcctgtcgatcagccgggagatcgcctacctgctcggcggcgccatcaccgccgaa
agcgcgctcggccggggcagcacgttcactctgtatctcccggtggcccggccggacttc
caggaggcgccgccccgcgagcgggaggacgcgcagcaggccgacagccgcccggagcac
actcccgctcccaccacgccacagcagcaccggagactgctcgtcgtggaggaacgcccg
caaggcctgttgtcgctggtcgcgcagagcgccgtcgccgaactcgcggacagcaacgac
ccgcgtggcccggtccaggtggtcaccacggtcggggtggaagaggcggccgcggcgatg
gctgccgaagcgttccactgcgtggtgctcgagctggacatgcccgacagcgccgcgctg
cgcttcctggagacgatggacggggacgccgcgttgcgcagcgtcccggtactcgtccac
aaccgccggctcgacgccgagcaggaacgcctactgctacaacgcagcacgcgtcagccg
ctcgagttgctgtccagcctggacgatctgcgggaacggatcgcgctgcacgtcaccgcc
gaggcgccgggcgacatgctgcccctggtacgtcgcgaggacccacccgccgccgcaccg
cagcggctggatggcaagctcgccggccgcaccgtgctcatcatcgacgacgacgcgcgt
aacctcttcgcgctcagcagcatcctcgaactgcacggcgtgagcgtgctgcacgcggag
gacgggcgcgagggcatcgacaagctcctcgctcacccggagacggacctggtcctgatg
gacgtgatgatgcccgagatggacggttacaccgcgacggcgacgatccgcgagatgccg
cagtacgagagcctgccgatcatcgcggtgacggccaaggcgatgctgggcgaccgcgag
aagagcctcgcggcgggcgccaacgactacgtcaccaaaccggtcgacgcggacgcgttg
ctcgcgtgcatccagcactggctggccgtctga
DBGET
integrated database retrieval system
