KEGG   Naegleria gruberi: NAEGRDRAFT_1097
Entry
NAEGRDRAFT_1097   CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ngr  Naegleria gruberi
Pathway
ngr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NAEGRDRAFT_1097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_1097
   03036 Chromosome and associated proteins [BR:ngr03036]
    NAEGRDRAFT_1097
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     NAEGRDRAFT_1097
   Coactivators
    SAGA/TFTC/STAGA complex
     NAEGRDRAFT_1097
Chromosome and associated proteins [BR:ngr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     NAEGRDRAFT_1097
    STAGA complex
     NAEGRDRAFT_1097
    TFTC complex
     NAEGRDRAFT_1097
    SAGA complex
     NAEGRDRAFT_1097
    SLIK complex
     NAEGRDRAFT_1097
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Histone Sigma70_ner CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 8862783
NCBI-ProteinID: XP_002682262
JGI: Naegr1_1097
LinkDB
AA seq 399 aa
LSFFQKETIQVIAQSVGITKLKDEIAQALALDVEYRVREIIQDASKCMKHAKRGVLTTDD
ISNALAMKNIEPLYGFKGQSSQPNRFRRVKQTKDLYFLEDVELDLKDCLEKPLPKIPIGP
SIFTHWLAIQGIQPKIPQNPTIEETESERKKESKDKDQSKKVSSSHDPNVEFKPLVKHIL
SEELQMYFEKVTEAIKDTTNQKKELRKAVIESLATDSGINQLVPYFTQFIASEVTNNMRN
LTLLYRLMEMTKALLVNPNIHIELYLHQIMPSILTCIVGKTLCENPYENHWGLRDFSANT
IAYICRKFGSSYHTLQPRITKTLLHAFLDPKRSRATHYGAIVGITALGSHVTQLLLLEPP
KNSNLKIFCNLLLPELVSSDMNTKHQAFMCYKALLTAPG
NT seq 1197 nt   +upstreamnt  +downstreamnt
ttatctttctttcagaaggagacgattcaagtgatcgctcaatctgtgggcattactaaa
ttaaaagatgaaattgctcaagctttggctcttgatgttgaatatagagtgagagaaata
atacaagatgcttcaaagtgtatgaaacatgctaagagaggagttttaactacagatgat
attagtaatgccttggcaatgaagaatatcgagccactttacggattcaaaggacaatca
tcacaaccaaatagatttaggagagttaaacaaacgaaagatttatactttttggaggat
gtagaacttgatttgaaggattgtttggaaaaacctcttccaaagataccaataggacca
tcaatatttacacactggttggccattcaaggtattcaaccaaagattcctcaaaatcct
actattgaagaaacagaatcggaaagaaagaaggaatcaaaagataaggatcaatccaag
aaagtttcatcatcacacgatcctaatgtagaatttaaaccacttgtcaaacatatatta
tcggaagaactccaaatgtactttgaaaaagttacagaagctatcaaagatactacaaac
caaaagaaagaactaagaaaagctgtcattgaaagcttggcaactgattctggtattaat
caactcgtcccttattttactcaatttattgctagtgaagtcacaaataatatgagaaat
ttgactcttctttatagattgatggaaatgacaaaagcacttcttgtcaacccaaatatt
catattgaactttatcttcatcaaataatgccttcaattctgacttgtattgttggtaaa
actttatgtgaaaatccatatgaaaaccattggggacttcgagacttttcagcaaatact
attgcctatatttgtcgcaaatttggctcctcatatcataccctccaacccagaattact
aaaacattgcttcatgcatttttagatccaaaaaggtcaagggcaactcattatggtgct
attgtaggaattacagctctaggatcacatgtaacacaactcttgctcttggaacctcct
aagaattctaaccttaaaatattttgcaatttactccttcctgaacttgtttcctctgac
atgaacactaaacaccaggcctttatgtgttacaaagcattattaacagcccctgga

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