Naegleria gruberi: NAEGRDRAFT_29557
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Entry
NAEGRDRAFT_29557 CDS
T01241
Name
(RefSeq) DNA topoisomerase II
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngr03032
]
NAEGRDRAFT_29557
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_29557
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NAEGRDRAFT_29557
DNA replication proteins [BR:
ngr03032
]
Eukaryotic type
DNA Topoisomerases
NAEGRDRAFT_29557
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
NAEGRDRAFT_29557
Centrosome formation proteins
Centriole proteins
NAEGRDRAFT_29557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
8863460
NCBI-ProteinID:
XP_002682923
JGI:
Naegr1_29557
UniProt:
D2UZM0
LinkDB
All DBs
AA seq
1457 aa
AA seq
DB search
MPPKKKAPAAAPKRKRKEESDDEASAAEESDDEVEFIDHDESNNNKNKTVEEIYQKKSLR
EQILLRPDTYVGSVNMQEGEDMWIWDDEDKRMKMKTIKFVPALYKIFDEILVNAADHSVR
DETCNKIKVTINPEQNEISVYNNGAGIPVKIHAEHKIYVPTMIFGHLLTSSNFDDTQKRV
TGGRNGYGAKLTNIFSEKFIVETVDSEEKKKFRQTWTQNMEKEEEPKITTCSKAESYTEI
TFYPDLSKFGMDKLDDDIVSLLKKRVYDLAGTLKTGIGIYLNGKKITGMKTFKDYVKLYT
IDKEIHYFEDGKRWKVGITLSEGSMQQVSFVNSICTTKGGKHVDHIVNQVSDNIKKALVK
KNNTIKPAYIKNQLWVFVSSLIINPSFDSQSKETLTTSMKDFGSKCKLDEAFLKKVTKMA
SEAVLKYADFKSEKALNKKSGTKKSRLTGISKLDDANDAGSKNSEKCTLILTEGDSAKAL
AVGGLSVVGRDYYGVFPLKGKPLNVRDCKLDKVVKNEEISTLAKILGLKFDKTYTKEDIK
SLRYGSIMIMADQDHDGSHIKGLLINFIHKFWPSLLKIPGFLKEFITPIVKATNNRTKKA
VTFFSIPEYETWKEGLSDTKGWTIKYYKGLGTSTAPEAKEYFSNMSLHQKRFKYDTDCDK
KITSVFSKAATDERKEWLNNHQEGTYIDHSKKEISYTDFIDKELILFSKADCKRSIPSIV
DGLKPGQRKILFSCFKRNLKKEIKVAQLAGYVSEQSAYHHGEDSLNGTVVNMAQNFVGSN
NINLLYPGGMFGTRLQGGKDSASPRYIFTKLSEITRYIFPKADDPVLEYLDDDGQSIEPR
FYVPILPMVLVNGSEGIGTAWSTNIETYNPVDIVEGLKALIKGEEAKEFHPWYKGFDGII
ERLAPTKWQTKGVIEKIDDNTLDISELPIRIWTESFKERLEKMMEAQQVDDFRENHTDVT
VSFTVKMTDKQMKDAEDAGLYDYFKLFKKFSTSNMVLFSEEGGIKEYETVLDILKEFYPI
RLKFYGKRKEYMLEKMKKELEILSNKVRFIMEVINETIQVKKRKKADLLKELKTKKYSSF
PKEKKIAAAGDIQNEEEEEEEDEEKDVADLTDGYNYLLSMPLWSLTVEKVKKLEKEKEEK
VKEVEQLENTKPETMWLSELDEFLEKLDSYEQKEQKEFDFYLKKIEKERGKHGKIPRPKG
YRATSKLRPDIVVNESTAKVKTTRKRATSVKKEEQADDDEKPKRGRKPAVKKEEDEDDAE
EKEEKPKRGRKPAAKKVVKEESDEEEDEEKEEKPKRGRKPAAKKKDDKDDEKPKRGRKPA
TKKQRVKRKTSAATTPAQPAASSSQSDEKQEDEELITAPIKTRETKPPTKKRKTSITDFF
ELKKKAEEVVVSDAEEDKEEPKARGRPVRTTRANKKVESEDEEEEEEEIIELSDSEASEP
EDGEDDGDEFIPSDEED
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaagaagaaagcaccagctgctgcaccaaaaagaaagagaaaagaagaatcg
gatgatgaagcttctgctgccgaagaatcagacgatgaggttgaattcattgatcatgat
gaatctaacaacaacaagaacaagactgtcgaagaaatttatcaaaagaaaagtcttcgt
gaacaaatccttttgagacctgatacctatgttgggtcagtcaatatgcaagaaggtgag
gatatgtggatttgggatgatgaagacaaaagaatgaagatgaaaactatcaaatttgtt
ccagccttgtataaaatctttgatgaaattctagtcaatgctgccgatcactctgttaga
gatgaaacttgcaacaagattaaagttacaatcaatcccgaacaaaacgaaatatcagtc
tacaataatggtgcaggcattcctgtcaagatccatgccgaacacaaaatttatgtgcca
acaatgatttttggtcacttgttaactagtagtaattttgatgatacacaaaaaagagtt
acaggtggtagaaatggttatggtgcaaaacttacaaacatattttccgaaaagtttatt
gttgaaacagtagactctgaggaaaagaaaaagtttagacaaacttggactcaaaatatg
gaaaaagaggaagaacctaaaattacaacatgttcaaaagctgaaagttatacagaaatt
actttttatcctgatctttctaaatttggaatggataaactagatgatgatattgtttcc
ctattaaaaaagagagtttatgatttggcaggtactcttaaaactggtattggtatttat
ttgaatggaaaaaagattacaggaatgaaaacatttaaagattatgtcaaactttacaca
atagataaggaaattcattactttgaagatggtaagagatggaaagttggtataacattg
agtgaaggttccatgcaacaagtcagttttgtcaatagtatttgcacaaccaaaggcggt
aaacatgttgatcatatcgtaaatcaagtttcagataatatcaaaaaggcactggttaaa
aaaaataacactatcaaacctgcctacattaagaatcaattatgggtatttgtcagttct
ctaattattaacccatcttttgattctcaatctaaggaaactcttaccacatctatgaaa
gattttggttctaaatgtaaattagatgaagcattcttaaagaaggtcactaaaatggct
tcagaagcagtattgaagtatgctgatttcaagtcagaaaaagccctcaataagaaatca
ggaactaaaaaatcaagattgactggtatttctaaattggatgatgctaacgatgctggt
agtaaaaattctgaaaagtgtaccttgattttaacagaaggagactctgctaaagctctt
gctgttggtggtttgagtgtagttggtagagattactacggagtattcccactaaaggga
aaacctctcaatgtaagagattgtaaactggataaggttgtaaagaatgaagaaattagt
actcttgctaaaattttagggttgaaatttgataagacatacacaaaggaggatatcaaa
tccctcagatatggtagtattatgatcatggctgatcaagatcacgacggttcacacatc
aaaggtttactcattaattttattcacaaattctggccaagcttactcaaaatacctgga
tttttgaaagaattcataacaccaatcgtaaaagcaactaacaatcgtaccaagaaagct
gtaacctttttcagtattcctgaatatgaaacatggaaagaaggactttcagatacaaaa
ggttggactattaaatactacaagggtttgggtacttcaacagcaccagaagcaaaggaa
tacttttcaaatatgtctctccaccaaaagagattcaagtatgatactgattgtgataaa
aagatcacctctgtattttccaaggctgccacagatgaaagaaaggaatggctaaataat
catcaagaaggtacctacattgatcactccaagaaggaaatttcatatacagactttatt
gataaggaattgattctcttctctaaggctgactgtaagagatctattcctagtattgtt
gatggtttaaaacctggtcaaagaaaaatcttattcagttgtttcaagagaaacctcaaa
aaggaaatcaaggttgctcagcttgccggttacgtttcagaacaatcagcctaccatcat
ggtgaagacagcttgaatggtacagttgtaaatatggctcaaaattttgttggtagcaac
aatatcaacttgctttatccaggtggtatgtttggtactcgtcttcaaggaggaaaggat
tctgccagtcccagatatatctttacaaaattatcagaaattaccagatacattttccct
aaggctgatgatccagtacttgaatatttggatgatgacggtcaatcaatagaaccaaga
ttttacgttccaattctcccaatggtgttagtaaatggatccgaaggtattggtactgcc
tggtctacaaacattgaaacctataatccagttgatattgtcgaaggactcaaggcactg
attaagggagaagaagctaaggagttccatccatggtataaaggctttgatggtattatt
gaaagattagctccaaccaaatggcaaaccaagggtgtcattgagaaaatcgatgataat
acacttgatatcagtgagttaccaattaggatatggacagaatcattcaaagaacgtctg
gaaaaaatgatggaagctcaacaagtagacgatttcagagaaaatcacactgatgtaact
gtctctttcacagttaaaatgactgataagcaaatgaaagatgctgaagacgctgggcta
tatgactactttaaattgtttaagaaattctctactagtaatatggttttattttctgaa
gagggtggtatcaaagaatatgaaactgttttggacattttgaaggagttttatccaatt
agattgaaattctatggcaaaagaaaagaatacatgctagaaaagatgaagaaggaatta
gaaatcctttccaacaaggtcagatttataatggaagttattaacgaaaccatccaagtg
aaaaagagaaagaaggcagacctgttaaaagaactcaaaacaaagaagtattcttcattc
ccaaaggaaaagaagattgcagcagcaggagatatccaaaacgaggaagaagaggaagaa
gaggatgaagaaaaggatgttgcagatcttactgacggatacaattatcttttgtccatg
cctttgtggtcattaactgttgagaaagtaaagaaattagaaaaagaaaaagaggaaaag
gtaaaggaagttgaacagttggaaaatactaaacctgaaacaatgtggctttctgagttg
gacgaatttttggaaaagttagattcatatgagcaaaaggaacaaaaggagtttgacttt
taccttaagaaaattgaaaaggaaagaggaaaacatggtaaaattccaagacctaagggt
tatcgtgccacttccaaactaagacctgacattgtcgtaaatgagtcaacagccaaggtc
aagaccaccagaaagagggctacatctgtaaagaaagaagaacaagctgacgatgatgaa
aagccaaaacgtggtagaaaaccagctgtaaagaaagaagaggatgaagacgatgcagaa
gaaaaggaagaaaagccaaaacgtggcagaaaaccagctgccaaaaaggtagtaaaggaa
gaatctgacgaagaggaagatgaagaaaaggaagagaagccaaaacgaggaagaaagcct
gcagctaaaaagaaagatgacaaagacgatgaaaaaccaaaacgtggcagaaaaccagct
accaaaaaacaaagagtcaagaggaaaacttctgctgcaacaactcctgcccaaccagct
gccagtagcagtcagagtgacgaaaaacaagaggatgaggaacttatcactgcccctata
aagaccagggaaacaaaaccaccaaccaaaaagaggaaaaccagtattacagactttttt
gaattgaagaagaaagctgaagaagttgttgtttctgatgctgaagaagataaagaagag
cctaaagccagaggtagacctgttaggacaaccagagccaataagaaggtggaatctgag
gatgaagaagaagaggaggaggaaataattgaactttctgatagtgaagccagtgaacca
gaggatggcgaagatgatggtgacgaatttattccatctgatgaagaggattaa
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