Naegleria gruberi: NAEGRDRAFT_29567
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Entry
NAEGRDRAFT_29567 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ngr
Naegleria gruberi
Pathway
ngr03020
RNA polymerase
ngr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NAEGRDRAFT_29567
09124 Replication and repair
03420 Nucleotide excision repair
NAEGRDRAFT_29567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_29567
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_29567
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NAEGRDRAFT_29567
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NAEGRDRAFT_29567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
UvsW-1
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
8863257
NCBI-ProteinID:
XP_002682669
JGI:
Naegr1_29567
UniProt:
D2UZC7
LinkDB
All DBs
AA seq
140 aa
AA seq
DB search
MNKPEAHELFDLEGEIKLREEKIEKMPNAANFIVNKEDHTLGNIIRMRLHEDKRVLFAGY
RNPHPLEHHIEIKIQTTDDIEPRDALVGTIDSLIRDFNYMKREFKHAAKEINNNFVAYDD
EHDDHHGHHYDEDDGVEDFQ
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccagaagcacacgaacttttcgatcttgaaggtgaaatcaagcttcgtgaa
gagaagattgaaaagatgccaaatgctgctaattttattgtcaacaaggaagatcacact
cttggaaatattattagaatgcgtttacatgaggataaacgtgttttatttgccggatac
agaaatcctcaccctctggaacatcacattgaaattaaaatacaaacaaccgatgatatt
gaaccaagagatgctctcgtaggaacaatagattctctgattagagattttaattatatg
aagagggaatttaaacatgctgctaaggaaattaataataattttgttgcctatgatgat
gaacatgacgatcatcacggacatcactatgatgaagatgatggtgttgaggatttccaa
taa
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