Naegleria gruberi: NAEGRDRAFT_30615
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Entry
NAEGRDRAFT_30615 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_30615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_30615
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NAEGRDRAFT_30615
Spliceosome [BR:
ngr03041
]
Complex C
Other components
Step II factors
NAEGRDRAFT_30615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8855111
NCBI-ProteinID:
XP_002681701
JGI:
Naegr1_30615
UniProt:
D2V2U4
LinkDB
All DBs
AA seq
454 aa
AA seq
DB search
MQIHLTEPAGDILVFLTGQEEIDTACQILYERMKALGSDVPELVILPIYAALPSEMQSKI
FDPAPPGGRKVVIATNIAETSITIDGILYVVDPGFVKQNIYNSKTGMDQLTVVPISQAAA
RQRAGRAGRTGPGKCYRLYTEEAYKNEMLPNTVPEIQRTNLANTVLTLKAMGINDLLNFD
FMDPPPPQALIAAMEQLYSLGALDDDGLLTKMGRKMAEFPLEPQMAKTLIASVDLKCSDE
VLTIVSMISVQGIFYRPKEKQQQADQKKSRFFQPEGDHLTLLAVYQSWERSNFSVPWCFE
NFIQSRSMKRAQDIRKQLLTIMDRYKLPVITCGKNFTKIRKAIASGFFAHAAKKDPQEGY
KTLVENQPVYVHPGSALFHKNPEWVVYHTLLLTTKEYMRDIITIEPKWLVELAPNFYRVH
DDAYLSKRKRQEKIEPLYNKYGDDPLQLLKRTKR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcacttgactgaaccagctggtgatattctggtctttttaaccggtcaggaa
gaaattgatactgcttgtcaaattctctatgaacgtatgaaagcattgggaagtgatgtt
ccagaacttgtcattttaccaatttatgctgccctaccatcagaaatgcaatccaaaatc
tttgaccctgcaccacctggtggcagaaaggttgttattgctacaaatattgctgaaact
tccattaccattgatggtattttgtatgtggtagatcctggttttgtaaaacaaaatatt
tacaattccaaaactggtatggatcaattgacagttgtcccaatctctcaggcagccgct
cgtcaaagagctggtagagctggtcgtactggaccaggtaaatgctatcgtttatatact
gaagaagcatacaaaaatgaaatgttgccaaatactgttcctgaaattcaaagaaccaac
ttggcaaatactgtattgactttgaaggctatgggtattaatgacttgttgaactttgat
tttatggatccaccaccacctcaagcacttattgctgctatggagcaattgtacagtcta
ggagctcttgacgatgatggtctattaactaaaatgggaagaaagatggcagaatttcct
ctcgaaccacaaatggcaaaaacccttattgcctctgtagatttgaaatgttctgatgag
gttttaacaattgtttccatgatttcagtacaaggaattttctatagaccaaaagagaag
caacaacaagctgatcagaaaaagtcaagatttttccaacctgaaggagatcacttgaca
cttcttgcagtttatcaatcatgggaaagaagtaatttttctgttccttggtgttttgaa
aactttatccaatccagatcaatgaaaagagctcaggatattcgaaaacaattattaaca
attatggacagatataaattgccagtcattacatgtggaaagaactttaccaagattaga
aaggctattgccagtggattttttgcccatgcagccaagaaagatccacaagaaggatac
aagacacttgttgaaaaccaacctgtatatgtgcatccaggaagtgctctattccacaag
aatcctgaatgggttgtttaccataccttactattgacaactaaggagtatatgcgtgat
attattaccattgaaccaaagtggttggttgaattggctccaaacttttaccgagttcac
gatgatgcttacctttctaagagaaagagacaagaaaaaattgaaccactttataacaag
tacggcgatgatcctctccaattactaaagcgaacaaagagataa
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integrated database retrieval system
