Naegleria gruberi: NAEGRDRAFT_3080
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Entry
NAEGRDRAFT_3080 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_3080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_3080
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
NAEGRDRAFT_3080
Complex C
U4/U6.U5 tri-SnRNP related factors
NAEGRDRAFT_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
8861473
NCBI-ProteinID:
XP_002680815
JGI:
Naegr1_3080
UniProt:
D2V594
LinkDB
All DBs
AA seq
175 aa
AA seq
DB search
TVHSTNSQNLIEQITRNKIFNSIYYKEECFGLNAATVIDKAENLDSIGGTFGGLRKPTNF
LSLLMKMLQIEVDLESTVAYIHNGEFKYLTALGALYLRLVGNAVDVYEQLEPLYSDYRKL
RLRLIDGSCKILHMDEFIEMLLTSDSFCDVKLPFLLSRKVLEKNGKLGPYVSALE
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
actgtacactctactaattctcagaatttaattgaacaaattacgagaaataagattttc
aactctatttattataaggaagaatgctttggtttgaatgctgctacagtaattgataaa
gcagaaaatttggattctattggaggaacttttggagggttgagaaaaccaacaaatttt
ctctctcttttaatgaaaatgttacaaattgaagtggatttggagtcgactgttgcatat
attcataatggagagtttaaatacttgacagctttgggagctctctatttgagattggtt
ggaaatgctgtagatgtttatgagcaattggaaccgctatattcagattatagaaagttg
agattaagactcattgatggttcttgtaaaattttgcatatggatgaatttattgaaatg
ttacttacgagtgattcattttgtgatgttaaattgccattcctgctgagtagaaaggta
ttggaaaagaatggtaaattgggtccatatgtttctgcacttgaa
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