KEGG   Naegleria gruberi: NAEGRDRAFT_3080
Entry
NAEGRDRAFT_3080   CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
ngr  Naegleria gruberi
Pathway
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_3080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_3080
Spliceosome [BR:ngr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    NAEGRDRAFT_3080
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    NAEGRDRAFT_3080
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 8861473
NCBI-ProteinID: XP_002680815
JGI: Naegr1_3080
UniProt: D2V594
LinkDB
AA seq 175 aa
TVHSTNSQNLIEQITRNKIFNSIYYKEECFGLNAATVIDKAENLDSIGGTFGGLRKPTNF
LSLLMKMLQIEVDLESTVAYIHNGEFKYLTALGALYLRLVGNAVDVYEQLEPLYSDYRKL
RLRLIDGSCKILHMDEFIEMLLTSDSFCDVKLPFLLSRKVLEKNGKLGPYVSALE
NT seq 525 nt   +upstreamnt  +downstreamnt
actgtacactctactaattctcagaatttaattgaacaaattacgagaaataagattttc
aactctatttattataaggaagaatgctttggtttgaatgctgctacagtaattgataaa
gcagaaaatttggattctattggaggaacttttggagggttgagaaaaccaacaaatttt
ctctctcttttaatgaaaatgttacaaattgaagtggatttggagtcgactgttgcatat
attcataatggagagtttaaatacttgacagctttgggagctctctatttgagattggtt
ggaaatgctgtagatgtttatgagcaattggaaccgctatattcagattatagaaagttg
agattaagactcattgatggttcttgtaaaattttgcatatggatgaatttattgaaatg
ttacttacgagtgattcattttgtgatgttaaattgccattcctgctgagtagaaaggta
ttggaaaagaatggtaaattgggtccatatgtttctgcacttgaa

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