Naegleria gruberi: NAEGRDRAFT_31228
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Entry
NAEGRDRAFT_31228 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_31228
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_31228
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NAEGRDRAFT_31228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8849604
NCBI-ProteinID:
XP_002680899
JGI:
Naegr1_31228
UniProt:
D2V4T2
LinkDB
All DBs
AA seq
452 aa
AA seq
DB search
MTNEDEIRNKEDIKAFCSRKGAPIPKPITQFNHINFPHFIQNQFKEMNFKEPTAIQKQAW
PIVMSGNDMIGLAETGSGKTLAFLLPGLMHVLAQKELKKGDGPIMVILTPTRELAIQIHG
ACENFCNAFVPDSKDRALKIACLYGGEVRKTQIKECRSKPQVIIATPGRLLDFLQAGITN
MKRCSYLVLDEADRMLDMGFNPQISQITSQVTPDRQTLFFSATWNRSVQSMAMSYVSKAE
PHFIVNIGSIETSANHRVKQSFLFIQESDKIARLTDLLDKLIKNPEDCRTLVFCKTKKRT
DVVTERLREAGWPSLSIHGERKQEEREWVLEEFRSGKTPILVATDVAARGLDVENVKYVI
NYDMPHEIDSYIHRIGRTGRAGKEGNSVSFFTPEDVQLCTPLIKVLEEAEQDVPDKLVKL
RDLSTKSHGDLSIKEQRQKDKIEMLTEKKKRK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgaagatgaaattagaaacaaggaagatattaaagcattctgctcacgtaaa
ggtgctccaattccaaagccaattacacaatttaatcatatcaatttcccacactttatt
caaaatcaatttaaggaaatgaatttcaaagaaccaacagctattcaaaaacaagcatgg
ccaattgttatgagtggaaatgatatgattggtcttgctgaaacaggtagtggtaaaaca
ttggcctttttattaccaggtttgatgcatgttttggcacaaaaggaattaaagaaagga
gatggaccaattatggttattttgacaccaaccagagaattggccatccaaattcatgga
gcttgtgaaaacttttgcaatgctttcgttccagatagtaaggatagagctttgaaaatt
gcctgtctctatggtggtgaagttagaaagactcaaatcaaggaatgtagatccaaacca
caagttatcattgctacacctggtagacttcttgactttttacaggcaggtattacaaac
atgaaacgatgctcatatcttgttttggatgaagctgatagaatgttggatatgggtttc
aatccacaaatttcacaaattacatctcaagttactccagatagacaaacattatttttc
agtgctacttggaatagatctgtccaatccatggccatgtcatatgttagtaaggcagag
ccacattttattgtaaatataggttccatagaaacatcagcaaatcacagagttaaacaa
tcatttttatttattcaagaatcagacaagattgccagattgacagatttattagataaa
ttaattaagaatccagaggattgcagaacattagtattttgtaaaacaaagaagagaact
gatgttgtgacagagagattgagagaagctgggtggccatcactcagtattcacggtgaa
agaaagcaagaagaaagagaatgggttttggaagaattcagaagtggaaagacacctatt
ctcgtcgccactgatgttgctgctagaggtttggatgtggaaaatgtgaaatatgttatc
aattatgatatgccacacgaaattgactcatatatccatagaattggtagaactggtaga
gctggaaaggaaggtaactctgtttcattcttcacaccagaagatgttcaattgtgtact
cctcttatcaaggttttggaagaagctgaacaagacgtacctgacaaacttgtgaaatta
cgtgatctctcaaccaagtctcatggagacttgtcaattaaggaacaaagacaaaaggat
aagattgaaatgttaacagaaaagaagaagagaaagtaa
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