Naegleria gruberi: NAEGRDRAFT_31512
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Entry
NAEGRDRAFT_31512 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
ngr
Naegleria gruberi
Pathway
ngr03420
Nucleotide excision repair
ngr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
NAEGRDRAFT_31512
09124 Replication and repair
03420 Nucleotide excision repair
NAEGRDRAFT_31512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngr04121
]
NAEGRDRAFT_31512
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_31512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngr04147
]
NAEGRDRAFT_31512
Ubiquitin system [BR:
ngr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
NAEGRDRAFT_31512
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
NAEGRDRAFT_31512
TCR (transcription coupled repair) factors
Cul4-CSA complex
NAEGRDRAFT_31512
Exosome [BR:
ngr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NAEGRDRAFT_31512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HTH_69
ORC5_lid
DUF5856
Motif
Other DBs
NCBI-GeneID:
8849115
NCBI-ProteinID:
XP_002680365
JGI:
Naegr1_31512
UniProt:
D2V6Q8
LinkDB
All DBs
AA seq
772 aa
AA seq
DB search
MTTTIPSTSGFTKNNTTASTGGGLTNPSPSVTPTKKKITCLKIKPLSLKPTVSNFEEETW
NKLNNAVVAIQKKEKICTGQEELYQLCSDLARHKKSESTYSKLKLLCSKHIENVIYDLGH
KATTDHTTFLNIVVKSWEEFTDQINMIRSIFLYLDRSYVMTIPDKSIWDMNLQIFKQNLK
INEHLLKKIISGILILIKHERSGESIDKSVVQRLIRMLTSLHLYEDEFEKSFLEETRSFY
SNDGLNNIDKLNVPEYLQYVESRLRQEVDRVTNYLSKLTKKPLIQIVENELIKKHVKTIL
DKGFEELMDLNRIMDLNRMYGLFKLVNELDAIKEAFTVYLKIRGKRIVDDDQNDKNMVQD
TLQFKSKIDQLHEQSFHKNEEFKHAIRKAFEYFLNIVPNKPSELIAKYIDGKLKNSKGLT
DDELERCMDNALTIFKYINGKDIFEAFYKKDLGKRLLFGKTSSYDAEKTMISKLRAECGT
QFSNKLEGMFKDIDISAELMKGYETSAEFKKFINEVGEEKDRALQIASSLGVKVLTLSYW
PNYTPDTLNLPMELSLLQDSFRDFYTHKYSGRILKWVSNLGQCSMKALFPCGKKELIISF
YQAVVLLQFNSKEKISVRELKQSTGIQDEKQLILTLQSLAFHKEKILKKETKGTQVEEND
IFFVNEDYSQSKTKIKIDSFQLKETKKEREETTEKVLLDRSYVIDAAIVRIMKTRKQLTH
QQLLTEVLSQVRFSIQGQDVKKRIESLIDREYLERDNNSQAGSANCIYHYVA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacaataccatcaacaagtggatttactaaaaacaatacaacagcatcaaca
ggaggaggtttaacaaatccatcaccttcagttacaccaacaaagaaaaagataacttgt
cttaaaatcaaacctctgtctttaaaaccgacagtatctaactttgaagaagaaacatgg
aacaagttaaataacgctgttgttgccattcaaaaaaaggagaaaatttgtactggacaa
gaagaactttatcaactttgttccgatttggcaagacataaaaaatcagaaagtacctat
tccaaattgaaattactttgttctaaacatattgaaaatgtaatttatgatttaggacat
aaagcaacaacagatcacacaacatttttaaatattgtagttaaaagttgggaagaattc
actgatcaaattaatatgataagatctattttcttatatttagataggtcttatgtaatg
acaataccagataaatctatttgggatatgaatttacaaatatttaaacaaaatttaaag
attaatgaacatttacttaaaaaaataatatctgggattttaattttaattaaacatgaa
agaagtggagaaagtattgataaatcagttgttcaacgtttaattagaatgttaacatct
ttacatttatatgaagatgaatttgaaaaatcatttttagaagaaactagatcattttat
tctaatgatggtttaaataatattgataaattaaatgtaccagaatatttacaatatgtt
gaatctagattaagacaagaagttgatagagttacaaattatttaagtaaattaacaaag
aaacctcttatacaaatagtagaaaatgaattgataaagaaacatgttaaaacaatttta
gataaaggatttgaagaattaatggatcttaatcgtattatggatcttaatagaatgtat
ggattatttaaattagtcaatgaacttgatgcaattaaagaagcatttacagtctattta
aagattagaggtaaaagaattgttgatgatgatcaaaatgataaaaatatggttcaagat
actcttcaatttaagagtaaaattgatcaattacatgaacaatctttccataagaatgaa
gaatttaaacatgctataagaaaagcctttgaatatttcttaaatattgttcctaacaaa
ccaagtgaacttattgcaaaatatattgatggaaaattaaagaatagtaagggtttaaca
gatgatgaattagaaagatgtatggataatgctctaacaattttcaaatatattaatggt
aaagatatatttgaagcattttataagaaggatttgggtaaaagattattatttggaaag
acttcatcatatgatgcagaaaagacaatgatttctaaattgagagcagaatgtggtaca
caattctcaaacaaattagaaggaatgtttaaagatattgatatttcagcggaattaatg
aaaggatatgaaactagtgcagaatttaagaaatttatcaatgaagtaggtgaagaaaag
gatagagcacttcaaattgcatcctccctcggtgttaaagtattaacattgagttattgg
ccaaattatacacctgatactttaaatttaccaatggaactttcattattacaagattca
tttagagatttttatacacacaaatattctggacgtattttgaaatgggtttcaaacttg
ggacaatgttcaatgaaagccttattcccatgtggtaaaaaggaattgataatatcattc
tatcaagcagttgtattattacaattcaattctaaagaaaagatttctgtacgagaactt
aaacaatcaacaggaattcaagatgaaaaacaattaattttaactttacaatcattagca
ttccataaggaaaaaattcttaagaaagaaactaaaggaactcaagttgaagagaatgat
attttctttgttaatgaagattattcacaatcaaaaacaaagattaaaattgattcattc
caattgaaagaaacaaagaaagaaagagaagaaacaactgaaaaagttttattggatcgt
tcctatgttattgatgcagcaattgttagaattatgaaaacaagaaaacaattaacacat
caacaattattaactgaagttttatctcaagttcgtttttcaattcaaggtcaagatgta
aagaagagaattgaaagtttaattgacagagaatatttagaaagagataataattcacaa
gcaggtagtgcaaattgtatttaccattacgttgcttaa
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