Naegleria gruberi: NAEGRDRAFT_32406
Help
Entry
NAEGRDRAFT_32406 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_32406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_32406
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NAEGRDRAFT_32406
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NAEGRDRAFT_32406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
8851399
NCBI-ProteinID:
XP_002678972
JGI:
Naegr1_32406
UniProt:
D2VA14
LinkDB
All DBs
AA seq
216 aa
AA seq
DB search
MNNKSSTETQQRVVPGQRIGQTDTYQSGRGTYVKDNRIHASVVGSVKISNHADIDESTPS
SSNNSSSTSEVASLPYIHVIQENNQETIVPNILSVVTAKVIKTTKSFAKVDILCVDGKPV
TKSGSAISGLLRVQDIRATEIDKVVLYECLRPGDIILAEVISLGDSRSYYISTARNELGV
IYATSSFGYPMIPLDWTTMVCTKTNARELRKVAKVL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaatcatcaacagaaacccaacaaagagttgtgccaggacaaagaatcggg
caaaccgatacttatcaatcaggacgaggaacatacgtgaaggataatcggatacatgct
agtgttgtaggaagtgttaaaatttctaatcatgctgatattgatgaatctacaccatca
tcatcaaataattcatcatcaacttcggaggttgcttctcttccatatattcatgttatt
caagaaaataatcaagaaactattgtaccaaatattctatcagttgttacagctaaagtt
atcaagacaacaaaatcatttgctaaagttgacattttgtgtgtggatggcaaacctgtt
actaaatcaggatcagcaattagtggacttttaagagttcaagatattagagcaacagaa
attgacaaggttgttctgtatgaatgtctcagaccaggtgatatcattcttgcagaagtc
atttcattaggtgattcgagaagttactacatttcaacagctagaaatgaattaggagtt
atttatgcaacatcaagttttggatatccaatgattcctctcgattggacaactatggtt
tgcacaaagacaaatgctagagaattaagaaaggttgccaaagttttgtaa
DBGET
integrated database retrieval system