KEGG   Naegleria gruberi: NAEGRDRAFT_32869
Entry
NAEGRDRAFT_32869  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
ngr  Naegleria gruberi
Pathway
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_32869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_32869
   03032 DNA replication proteins [BR:ngr03032]
    NAEGRDRAFT_32869
Spliceosome [BR:ngr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    NAEGRDRAFT_32869
  U2 snRNP components
    NAEGRDRAFT_32869
 Complex B
  U1 snRNP components
    NAEGRDRAFT_32869
  U4/U6.U5 tri-snRNP components
    NAEGRDRAFT_32869
 Complex C
  U2 snRNP components
    NAEGRDRAFT_32869
DNA replication proteins [BR:ngr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     NAEGRDRAFT_32869
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8857233
NCBI-ProteinID: XP_002678457
JGI: Naegr1_32869
UniProt: D2VC97
LinkDB
AA seq 118 aa
MSQTVAATTEAPQKTAEELEKEEELLFEKGPLSLLLESVREQTQILISCRNNRKLLARVK
AFDRHCNMVLENVQEMWTEQPKSGKGRKKSKPINKTRFTNKLFLRGDSVILVLRNPKR
NT seq 357 nt   +upstreamnt  +downstreamnt
atgtcgcaaacagtagcagccaccacagaagctccacaaaagactgctgaggaattggaa
aaggaagaggaattactatttgaaaagggaccactctcgttattgttggaaagtgttcgt
gaacaaacacaaattttaattagttgtagaaataatagaaaattgttggctagagttaaa
gcctttgatagacactgtaatatggtattggaaaatgtacaggaaatgtggacggaacaa
ccaaaaagtggaaagggaagaaaaaagtcaaagccaatcaacaagacacgtttcacaaac
aagttgtttttgagaggagattctgtaattttagtgttgagaaatccaaagagatga

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