Naegleria gruberi: NAEGRDRAFT_33170
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Entry
NAEGRDRAFT_33170 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAEGRDRAFT_33170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_33170
Enzymes [BR:
ngr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NAEGRDRAFT_33170
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NAEGRDRAFT_33170
Prokaryotic type
NAEGRDRAFT_33170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF7684
Motif
Other DBs
NCBI-GeneID:
8857078
NCBI-ProteinID:
XP_002677873
JGI:
Naegr1_33170
UniProt:
D2VDE4
LinkDB
All DBs
AA seq
229 aa
AA seq
DB search
LSSYLQDESWKELLDKEFQKSYFKKLNQSVAKEYEEKPKTVYPKKDEIFSALNVCPFDNV
KVVIIGQDPYPQWYAHGMSFSVKKGVTVPKSLQNIYQELGSDSDLDKPFTEPDHGYLMGW
AEQGVLLLNAVLTVEKGASNAHKGIGWETFTDAVIEQLAKKKNLAFLLWGKDAQQKGAKV
DKKNNLVITTSHPSPFSADKGFLGSKCFSKCNQYLVQCGIEPIDWSNLN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttatctagttatttgcaagatgaatcatggaaggaattgttggataaggaattccaaaag
tcatactttaagaaattgaaccaatctgttgctaaggaatatgaggaaaagccaaaaact
gtctatccaaagaaggatgaaatcttttctgctctcaatgtttgcccatttgataatgta
aaggttgtaattataggacaagatccgtatcctcaatggtatgctcacggaatgtccttc
tctgtaaagaagggtgttacagttccaaaatccttacaaaatatttatcaagaattgggt
agtgattctgatttggataagccattcacagaacctgatcatggctatttaatgggttgg
gctgaacaaggagttcttttgttaaatgctgtccttacagttgagaagggagcttccaat
gcacacaagggcattggatgggaaacttttactgatgctgtcattgaacaattggcaaag
aagaagaatctagcctttttattatggggtaaagatgcacaacaaaaaggagccaaagtt
gacaagaagaataatttggtcattactacctctcacccttcaccattctctgctgataaa
ggatttttaggatccaaatgtttctctaaatgtaatcaatacttggttcaatgtggaatt
gagccaattgattggtcaaatctcaattaa
DBGET
integrated database retrieval system
