Naegleria gruberi: NAEGRDRAFT_34062
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Entry
NAEGRDRAFT_34062 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_34062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_34062
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_34062
Spliceosome [BR:
ngr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NAEGRDRAFT_34062
Complex C
U5 SnRNP specific factors
NAEGRDRAFT_34062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
DDX23
Motif
Other DBs
NCBI-GeneID:
8856603
NCBI-ProteinID:
XP_002676619
JGI:
Naegr1_34062
UniProt:
D2VHF0
LinkDB
All DBs
AA seq
493 aa
AA seq
DB search
MQRTNEKTKISFEWDEKDDTTDKNSIISSSHSTVKNNQKKKIRKDKIEDERNWTEKSVNE
MTDRDWRIFREDFDIVVKGGRVPPPLRSWDETTLLPLEIINAITDLKFKEPTAVQKQCIP
IAMNGIDLVGLAETGSGKTASYIIPMCCQIAKLPRMNDEIAKDGPYGLILVPTRELAEQI
EREATKYARQFEFRVQAIIGGVSIEKQSRLIRGGCEILVATPGRLIDCLNNSIVVLNQCH
FIVLDEADKMIEMNFEKDVNTILENMPTHIQRQTMLFSATMPPEVENIAMKYLKKRVTVA
VGEVGRAVERIEQEVMWIKHENAKRDKLLELLYDADPPVIVFCNLKKEVDAIAKFVSNAG
FRSTSIHGNKSQEARNSALEAFKSGKFDVIVATDVLGRGIDISGVTLVVNYSLPKTISAY
THRIGRTGRAGRTGRAVSFLTKDDTEIMYDLKKMLESTKNTVPEELAQHPSAAQKPDKKK
SDQPIGGGQESEE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaaccaatgaaaaaactaaaatttcctttgagtgggatgaaaaggatgacaca
actgataagaattcaataatctcctcttctcattctactgtgaaaaataatcaaaagaaa
aagattcgtaaagataaaattgaggatgaaagaaattggactgagaaatcagttaatgaa
atgactgacagagattggagaattttcagagaggactttgatatcgttgttaagggagga
agggttccacctccactaagatcttgggatgaaacaacactacttccactagaaattatt
aatgccattacagatttaaagtttaaagagccaacagctgtacaaaaacaatgtattcct
attgccatgaatggtatcgatcttgttgggcttgctgaaacaggttccggtaagacagca
tcgtatatcattccaatgtgttgtcaaattgctaaattacctagaatgaatgacgagatt
gctaaagatggtccgtatggcctgattctagtaccaactcgtgaattggctgaacaaatc
gagagagaagccactaaatatgccagacaattcgaatttagagtgcaggcaattattggt
ggtgtcagtattgaaaaacaaagtagattaattagaggaggatgtgaaattctagtggcc
acaccaggtcgtctcattgactgcttgaataactcaattgttgttctcaatcaatgtcat
tttatagttttggatgaagcagacaaaatgattgaaatgaattttgaaaaggatgtaaat
acaattttggaaaatatgccaacccatattcaaagacaaaccatgttatttagtgcaacc
atgcctccagaagttgagaacattgccatgaaatatctcaaaaagagagttactgtggct
gtaggtgaagttggtagggcagttgaacgtattgaacaagaagtcatgtggatcaaacat
gaaaatgccaagagagacaaattattggaactcttatatgatgcagatccacctgttatt
gtattttgtaatttgaagaaggaagttgatgcgattgccaagtttgtatcaaatgcagga
ttcagatcaacatctattcatggtaacaaatcacaagaggcacgtaattctgctcttgag
gcattcaaatcaggtaaatttgatgttatagtggcaactgatgttttgggtagaggtatt
gatattagtggtgtgacattggttgtaaactattctcttccaaaaaccatctctgcttac
actcacagaattggtagaactggtcgtgctggtagaacaggtagggctgtttctttcctc
acaaaagatgatactgaaatcatgtatgatttgaagaaaatgctcgagtctactaagaat
actgttccagaagaattagctcaacatccttctgcagctcaaaagcctgataagaaaaaa
tcagatcaaccaataggaggaggacaagaatctgaagaataa
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integrated database retrieval system
