Naegleria gruberi: NAEGRDRAFT_34170
Help
Entry
NAEGRDRAFT_34170 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_34170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_34170
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NAEGRDRAFT_34170
mRNA degradation factors
5'-3' decay
Lsm complex
NAEGRDRAFT_34170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
8847633
NCBI-ProteinID:
XP_002676482
JGI:
Naegr1_34170
LinkDB
All DBs
AA seq
150 aa
AA seq
DB search
MSPQEDDEENDELKVDFYFPGAASLSDQLDKKVMVILRDGKKLIGILRCYDQFVNMTLEK
TVERIVVEDKYGDLDVGLYIVRGENVVLMGEVDESRDLSLKQVPVDEILMLSKLEQEKEE
ERSKLKQLHLRNRGKISISRFKLFILFRFT
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcaagaagacgacgaagaaaatgatgaattaaaagtggatttttactttcca
ggagcagccagtctttcggatcaattagataaaaaagtgatggtaattttgagagatggt
aaaaaactaatcggaattcttcgttgttatgaccaatttgtaaatatgactctagagaaa
actgttgaacggatagtagtagaagataaatatggtgatttggatgttggtttatatatc
gttagaggtgaaaatgtagtattaatgggagaagttgatgaatcacgagacttatcttta
aaacaagttccagttgatgaaattttaatgttaagtaaattagaacaagaaaaagaagaa
gaaagatccaaattgaaacaattacatttaagaaatagaggtaagatttcaatatcaaga
tttaaattatttattctttttaggtttacttga
DBGET
integrated database retrieval system