Naegleria gruberi: NAEGRDRAFT_34984
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Entry
NAEGRDRAFT_34984 CDS
T01241
Name
(RefSeq) DNA mismatch repair protein muts
KO
K08735
DNA mismatch repair protein MSH2
Organism
ngr
Naegleria gruberi
Pathway
ngr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NAEGRDRAFT_34984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_34984
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NAEGRDRAFT_34984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Rad17
AAA_27
AAA_22
SLS1_C
AAA_29
Motif
Other DBs
NCBI-GeneID:
8864044
NCBI-ProteinID:
XP_002682431
JGI:
Naegr1_34984
UniProt:
D2V0B3
LinkDB
All DBs
AA seq
909 aa
AA seq
DB search
MYLKIETNEAKKNTIVFIQRKKRDAKADDPESQFTYDVHGHDAWFIDRHFCKTGYFKLFT
HKGVIDRTNPYKTEDGKKYNGLPFITLKQSHFHQYVRGLLLNHGKRVEIWSEDKYECLKS
ASPGNLQEFEELLENDSQTGVVCAIYIKKELNERKIGLAFADTTLRTIGFCSFTDSDQLA
NLDSTLSQIETKEALVFYQKNDPDSERLKDVLRRSNILETERKKSDFVKKSTLEADICRL
TGEERVMNLEFNEEHVANSTQALLDYLELLDDINNYSHYKTKSQQISLFMKLDSTCVSSL
NILPPPNDRSKNTSLFGLLNQCVTRPGARLLREWIRQPLTSHSEIEKRLDMVQIFAEENE
LREEIKELLKKVPDLDKILIRVVKQRVTIEDIVKLYICVQQVPAVKEVMNRVRNEKSFVK
DNLYMDLMVHLDSNYADLQSFLQMVISIIDMEATEKHEYRINCKIDAELEKLMNDLNEII
SQCDEECKSVENDLNVNELFLEMTKKSVCFKVKKAQANALTGATNYTLIGPQSKSDVKFT
NDTLKELAKSYIDILEQYESKSQETLQKIREVVTTFAPAFTQLRETLASIDIFISFASVS
VNAAIPYTRPIIRPIDYEEEEIILYDCRHPVVEIQDSVDFKENTCILDRSQHQLHLITGP
NMGGKSTFIRQVAINVIMAQIGCFIPAREGSIVTVRDAILSRVGASDSTQRGISTFMAEM
LETAALLSTATSKSLIIVDELGRGTSTYDGFGLAYAIIEHLMDSTNAFTLFATHFHELRA
LIEKFPAICNERMDSKIIDNRLVMLYQIVTDNEEAITENSNSFGIEVAKLADFPIDVIRV
AESKAEEIKQLMNTTQLQILEPSTKEVADSQRRAKIHSALSKFYNFNFSDRTLQEIKTFL
LDNFNESFH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgaagatagagaccaatgaagcaaagaaaaatactattgtctttattcaaaga
aaaaaaagggatgccaaagcagatgatcctgaatcgcaatttacttatgacgttcatggt
catgatgcatggtttattgatagacacttttgtaaaacaggatactttaaactttttaca
cacaaaggtgttattgatcgtactaatccttataaaacagaagatggtaaaaaatataat
gggcttcctttcattacattgaagcagtcacacttccatcaatatgtcagaggtttatta
ttgaatcacggaaagagagtggaaatttggagtgaagataaatatgaatgtttaaaatct
gcttctccaggtaatttacaagaattcgaggagcttctggaaaatgattctcaaacaggt
gtggtgtgtgccatctatatcaagaaggaattaaatgagagaaagataggcctggcattc
gctgatactacacttagaactattggattctgttcattcaccgatagtgatcagttggca
aacttggattctactctttctcaaattgaaacaaaggaagctctcgtattttatcaaaag
aatgatcctgactctgaaagacttaaggacgttctcagaagaagtaacattctagaaact
gaacgtaaaaaatcagattttgtaaagaaaagtactttggaggctgacatttgtagatta
actggtgaagaaagagttatgaatttagaatttaatgaagaacatgttgcaaattctact
caggcccttttagattatttagaattattggatgatattaataattattcacactacaaa
acaaaatcccaacaaatatccttattcatgaagttagatagtacttgtgtctcttcattg
aacatcttaccaccaccaaacgatagatccaagaatacttctctgtttggtttattaaac
caatgtgtaactagacctggagcgagattattgagagaatggattagacaacctctaaca
agtcattcagaaatcgagaaaagattagacatggttcaaatattcgctgaagaaaacgaa
ttaagagaagaaatcaaggagcttcttaaaaaggttcctgatcttgataagattttaatc
agggttgtaaagcagagagttactatagaagatattgtaaaattatatatttgtgtacag
caagttcctgccgtgaaagaagttatgaacagagtcaggaatgaaaaatcatttgtaaaa
gacaacttgtatatggacttgatggtgcatttagattctaattatgctgatctacaaagt
tttttgcaaatggtcatcagtattatagatatggaggcaaccgagaaacatgaatacaga
attaattgtaaaattgatgcagaactagaaaaattgatgaatgatctcaatgaaattatt
tcacaatgtgatgaagaatgtaaatcagttgaaaatgatttgaatgttaatgagttgttt
ttagaaatgacaaaaaagagtgtttgtttcaaagttaaaaaggcacaggcaaatgctttg
accggtgcaacaaattatactttaataggtccacagtctaaatcagatgtcaagtttact
aatgatacattgaaggaactagccaaatcatatattgacattcttgagcaatatgaaagc
aaatctcaagagactctccaaaaaataagagaagttgtaacaacttttgcacctgcattt
acacaactcagagaaaccttggcaagtattgatattttcatctcttttgcatctgtttct
gtaaatgctgccattccatacactagacctatcataagaccaatagattatgaagaagaa
gaaattattctttacgattgtagacatcctgttgtagagattcaggattctgtagacttt
aaggagaatacatgcatcttagatcgctcacaacatcaattacatttaataactggtcca
aacatgggaggtaaatctacatttatcagacaagtggcaatcaatgtgattatggctcaa
attggttgttttatccctgcaagagagggtagtatcgtcactgtaagagatgcaattctt
tccagagttggtgcatcagattctactcaaagaggcattagtacattcatggctgaaatg
ttagaaactgctgcactcctgtcaacagctacttctaaatctcttattattgtagatgag
ttgggaagaggaacatcgacttatgacggttttggtcttgcttatgcaatcattgaacac
ctaatggacagcacaaatgctttcactttgtttgcaactcacttccacgaattgagagct
ttaattgagaagttcccagcaatttgtaatgaaagaatggattcaaagattattgacaat
aggcttgtcatgttatatcaaatagtaacagataacgaagaagccattacagaaaacagt
aatagctttggtattgaagttgctaaacttgctgatttcccgattgatgtgataagagtg
gccgaaagcaaagctgaagagatcaaacaattgatgaatacaacgcaattacaaatattg
gagccatcaacgaaagaagttgctgacagccaaagacgcgccaaaattcattctgctctt
tctaaattttacaactttaacttttcggacagaacattgcaagagattaagacatttctt
cttgacaactttaatgaatcttttcattag
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