KEGG   Naegleria gruberi: NAEGRDRAFT_35079
Entry
NAEGRDRAFT_35079  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
ngr  Naegleria gruberi
Pathway
ngr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    NAEGRDRAFT_35079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_35079
   03036 Chromosome and associated proteins [BR:ngr03036]
    NAEGRDRAFT_35079
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     NAEGRDRAFT_35079
Chromosome and associated proteins [BR:ngr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     NAEGRDRAFT_35079
    COMPASS/SET1 complex (yeast)
     NAEGRDRAFT_35079
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR3_2nd ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st PAC11 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N DSE1_N KNTC1_N PQQ
Other DBs
NCBI-GeneID: 8855505
NCBI-ProteinID: XP_002682365
JGI: Naegr1_35079
UniProt: D2V134
LinkDB
AA seq 318 aa
MQTPLNINVVKSLGLGKVYKGHSKEINGMDFFRDGKSLLCSSDDDNITWFDCTTLTPKSE
PSKTIPSKKYGCSLVKFTHSEDACIHASNKEGLNDDIRYLNIHNGNFLRYFKGHTKKVVS
LSMCPIDDGFASTSLDNTLRLWDLRKSSETHKCAFTGKPVTAYDPKGLVLAVTTPPGVIK
LYDVRNLDSPFSTFALTFQETPDYSSMLFSPDGNYITVVSSDSISLIDAFNGKELFRKTN
DEIRISQTGASFSPNSEFLFVGTEDGRLLTIETSSGKFCHSFTNTDFRHSGEVSACFNPQ
YCMLVSACQAVCFWVPSM
NT seq 957 nt   +upstreamnt  +downstreamnt
atgcaaacaccactcaacattaacgtagtcaaatcgttgggtctaggaaaagtctataaa
ggacactctaaagaaataaatggaatggatttctttagagatggaaaatcacttttatgt
tcatccgatgatgataatattacatggtttgattgtacaactcttactccgaagagtgaa
ccttctaaaacaatacccagcaaaaagtatggatgtagtctagttaaatttacacactct
gaagatgcttgtattcatgcttctaacaaggaaggattaaatgatgatataagatattta
aatatacataatggaaattttctcagatactttaaaggacatacaaagaaggttgtctcc
ttgtccatgtgtcctattgatgatggttttgcatcaacatcacttgataatactttacga
ttgtgggatttgagaaaatcatcggaaacacacaaatgtgcatttacaggaaaacctgtt
actgcctatgatcctaaaggattggtactggcagttactacaccgcctggtgttatcaaa
ttatatgatgtcagaaatttggactcgccattttccacttttgctctcacttttcaagaa
actccagattattcttccatgcttttttcaccagatggaaattatattacagttgtttca
tcagattctatatcgctaattgatgctttcaatggaaaggaattattcagaaagaccaat
gatgaaattagaatttctcaaactggtgcttcattctcaccaaatagcgaatttttattt
gttggaacagaagatggacgactgctcacaattgaaactagttcaggaaaattctgtcac
tcattcacaaacacagatttcagacacagcggtgaagtgagtgcttgtttcaatccacaa
tattgtatgttagtgagtgcttgtcaagctgtttgtttctgggttccatccatgtaa

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