Naegleria gruberi: NAEGRDRAFT_35388
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Entry
NAEGRDRAFT_35388 CDS
T01241
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_35388
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
NAEGRDRAFT_35388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3535
Helicase_C
HEAT
HEAT_GCN1_C_2
HEAT_2
HEAT_ECM29
HEAT_MROH2B_C
TOR1L1_N
TPR_DNAAF5
HEAT_GCN1_C
Vac14_Fab1_bd
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
8852354
NCBI-ProteinID:
XP_002681510
JGI:
Naegr1_35388
UniProt:
D2V3G4
LinkDB
All DBs
AA seq
1788 aa
AA seq
DB search
MTSRLDRLLNLLDSGSPAVRSAAAKQIAEATKFHQAEIPSVLSKISVLLGSSSWETRSAA
GEAINAIAQNVPLYRPEQANIKKEELTQEQQVRNYEKLQEDYQTQQEKFRFANFNIRHVV
KNGIPLYGSNLAVPDEEQQIKHLKPKDKLAFHKRQIYGRLGYLSFEEKQSLLLCATEKEP
VNNHEAEEVNSQPLSAKERREKFMQKQNKKQNNQSIDEQIEEDQRQAKKMKTVITEQPQS
ENKIVIESAVDTSDMFEHERWPFQILTERLLVDLFNSSWTIRHGAAIAIREILKVPEQLQ
SAGKSIFTQNLQYANELWLEDCCVRVLCLFALDKFTDYLSDLPISPITETGAQILGLIFK
YLNSETVRHVITNLVILMGHDQEWKVRHNALLGLKYAVALRTEAIDELFGMVLPAIIMCL
SDEAGSTSADDVKAVAADCLVPIAEHVMRMDRNYVNGIFSILWDSLIDMDDLSSSTASIM
TLLAKLYSIPMYELVLADRLHLLVPRLYPYLRHNIITVRMSALETLQELIQRTEITANSW
ILKENVLKHIIALIFQNLILDPKENIVEKSLIVWEAFIRRIPEDYLTPIMARYIGAWASL
MSTPVGNNFDLSLMTLPEEVYNSISNRWGATDSLKRKYDGSKSLDNAEKQTFSMRLQVSD
MEELTLMRIATSKAIALFTISITQPQNLNELFTTFDLLLRSAFALHKETAGILLQNIFQT
CGERNVTFNLPETGLNLLSQIVDTVNLSNMVEIQHYFTPLVTECNYLLQFYSKLGWDVSS
FYSYNQEGLPSLNMSTAVAQDLIGKYREYYAQHLVEHPTLLQELETLAGRVKTALDTYFT
NWLLIQNRALSILSSALIFQGGVPQKSVLSKMMVQLLSTVESQASSLTLQKLACKSIAKM
LIVCKDLIPPPNSAIVKKLLDLLSKTMPKITVHKALEKENAQPNEEDEINELKDAASQVD
STKDDPSQIAQRGASISLNEIATIFKERLFIDLEPLRMHTLDVIFQQVDFSLLNKTNPQP
PEKTIVNALHILRSIVPSINSQLYETLSHVLGSIIANYVPHQDIEIRKHAALTISEICYY
MEEPALIIIVKQLVPLLANPTNVYSRRGSSLAIFSLISRLEMKCLPAVAFFAVPLLKRMS
DQDDVTREISSNCFGSVIKLLPLEKSAIPLKGLEKQLAEEHEFIDQLLDNSKVVPFDIPI
KINAELRQYQKDGVSWLAFLNKYNLHGILCDDMGLGKTLQTICMVYSDIHMRKIQFQQTG
NQEFVHLPSLVVCPPILLGHWADEISKFCPDLKSLQYYGSVAQRKLWRSEFHNQDIVILS
YDLLRNDIKDIVACQSNWNYCILDEGHIIKNKKTQITKAVKQIKANHRLLLSGTPIQNNV
LELWSLFDFLMPGFLGTEKEFNAKYSKPIQSSRDAKANSKEQASGTIALQNLHRQVLPFL
LRRVKEDVLHDLPEKIIQDYYCDLSPIQSKLYEFFAKKEISKVSQELKSQQEDKTKAKEI
SENSHVFKALKYLRKLCNHPCLVLEPDHPMYESVTQEIKQQGLDVRDVNLSPKLLSLKQL
LNDCGIGAGNSDVDSSNQHRVLIFCQLKQMLDIIQNELFAKYMPNVTFMRLDGDVETTKR
YEIVTKFNSDPTIDVLLLTTKIGGLGLNLTGADTVIFVEHDWNPSADLQAMDRAHRIGQK
KVVNVYRLITRNTLEEKIMGLQKFKTNISKSVINKENSSLSSMDTDQLVDLFNFSGSNGT
DSSSAAQLEKPKKSGLGQLMETMEDYDQDKQYQDFNLNSFMNNQSKHK
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcgtcttgatagattactcaatctgttggacagtggttcacctgctgttcga
tccgcggctgctaaacaaatagcagaagcaacaaaatttcatcaagccgaaataccttct
gtattgagcaaaattagtgttttactaggatcaagttcttgggaaacacgttctgctgct
ggtgaagcaatcaatgctattgcacaaaatgttcctctctacagaccagaacaagcaaat
attaaaaaggaagaattaacacaagaacaacaagtacgaaattatgaaaaattacaagaa
gactaccagacacaacaagagaaattccgttttgccaactttaatattaggcatgtagta
aagaatggaataccattatatggttcaaatcttgcagtgcccgatgaggaacaacaaatt
aaacacctcaaacctaaagacaaattagcatttcacaaacgtcaaatttatgggcgtcta
ggatatttatcatttgaagaaaaacaatccttgttgctttgtgcaactgagaaggaacct
gtaaacaatcatgaagctgaagaagtaaacagtcaacccctaagtgcaaaagaaagaaga
gaaaaattcatgcaaaaacaaaataagaaacaaaataatcagtctattgatgaacaaatc
gaggaagatcaaagacaagctaagaaaatgaaaacagtcattacagaacaaccacaatct
gaaaacaaaatagtgattgaaagtgctgtagatacatctgatatgtttgaacatgaaaga
tggccattccaaattttaactgaacgtctcctagttgatttgttcaattcatcttggaca
ataagacatggtgcagctattgcaattagagaaattcttaaagtaccagaacaacttcaa
tctgctggtaaatcaatattcactcaaaatttacaatatgcaaatgaattgtggttagaa
gattgctgtgttagagttttgtgtttatttgcacttgacaaatttacagattatttatcg
gatttaccaatatctccaattactgaaacaggagctcaaattctaggtttaattttcaaa
tatcttaatagtgaaacagtgagacatgtgattacaaatttagttattcttatgggacat
gatcaagaatggaaagttagacacaatgcactgctggggttgaaatatgctgttgcgctt
agaacagaggcaatagatgaattatttggaatggttcttcctgccataattatgtgttta
tctgatgaagctgggtctacatctgccgatgatgttaaagcagttgctgctgattgtttg
gttcctattgctgaacatgttatgagaatggatagaaattatgtgaatggtatcttttca
attttatgggattcacttattgatatggatgatttatcatcttcaacagcaagtataatg
acattattagctaaattatattccattccaatgtatgaacttgttcttgcagatagatta
catttattggtaccaagattatatccatacttgagacacaatattataactgtgagaatg
tcagcattggaaacacttcaagagcttattcaaagaactgaaattacagcaaattcttgg
attcttaaagaaaatgtgctaaaacatattattgctcttattttccaaaatttaattttg
gatcctaaagaaaatatagtagaaaagtctttgattgtttgggaagctttcattagacgt
attccagaagattacctcacaccgatcatggcgagatatattggtgcttgggcttcttta
atgtcaactccagttggaaataattttgacctttcattaatgactttaccagaagaagtt
tacaattcaatttctaatagatggggagcaacagattctcttaagagaaaatatgatgga
tctaaatcattggataacgcagaaaaacaaacattctctatgaggttacaagtttcagat
atggaagaactcactttaatgagaattgcaacttcaaaggctattgcactttttaccata
tcgataactcaaccacaaaatttgaacgaacttttcaccacttttgacttgttgttaaga
tcagcatttgcacttcacaaagaaacagctggtattttacttcaaaatattttccaaact
tgtggagaaagaaatgtaacatttaatttaccagaaacgggtttaaatctactttctcaa
atagtggatactgttaatttgagtaatatggttgaaattcaacattatttcacaccactg
gtcactgaatgtaattaccttcttcaattttattcaaaacttggctgggatgtttcttct
ttttattcatataatcaagaaggtcttccatctctgaacatgtcaacagctgttgcacaa
gatttgattgggaaatatcgtgaatattatgctcaacatttggttgaacatccaacactt
cttcaagaattggaaactcttgctggtagagtcaagacagcacttgatacttactttaca
aattggttactcattcaaaatagagcattatcaattttgtcatctgctttaattttccaa
ggaggtgttccacaaaaatcagttttatctaaaatgatggttcaacttctttcaactgtg
gaaagtcaagcatcaagtttaacacttcaaaaacttgcatgtaaatccattgcaaaaatg
ttaattgtttgtaaggatttaatacctccaccaaattcagccattgtaaagaagctttta
gatctcttatccaagacaatgccaaaaataactgtacacaaggcattggaaaaggaaaat
gctcaaccaaatgaagaagatgaaattaatgaattgaaagatgcagcttctcaagtagat
tctacaaaagatgatccttctcaaatagcacaaagaggtgcttcaatttccttgaatgaa
attgcaacaattttcaaggagaggctattcattgatctcgaaccattaagaatgcatact
cttgatgtaattttccaacaagttgattttagtttattgaataagacaaatcctcaacca
cctgaaaagactattgttaatgcacttcatatattgagaagtattgttccatcaattaat
tctcaactctatgaaacattatcacatgttttgggttcaattattgcaaattatgttcca
catcaagatattgaaattagaaaacatgcagctcttacaatttcagaaatttgttattat
atggaagaaccagcattgattattattgtaaaacaacttgtaccactacttgcaaatcca
acaaatgtttattcaagaagaggttcatcattggcaatattttcattaatttcaagactt
gaaatgaaatgtttaccagcagttgcattctttgcagttccacttttaaagagaatgagc
gatcaagatgatgttacacgtgaaatttcatcaaattgttttggttcagttatcaaactt
ttacctttggaaaaatcagccattccacttaaagggcttgaaaaacaattagcagaagaa
catgaatttattgatcaacttttagataattctaaagttgttccatttgatattccaatc
aaaattaatgcagaacttcgtcaatatcaaaaagatggagtttcatggttagcattcttg
aacaagtataatttacatggtattttatgcgatgatatgggtttgggtaaaactttacaa
acaatttgtatggtttatagtgatattcatatgagaaagattcaatttcaacaaactggt
aaccaagaatttgttcatttaccttcattggttgtatgtccaccaattttacttgggcat
tgggctgatgaaatttcaaagttttgtccagatttgaaatcacttcaatattatggttca
gttgctcagagaaaattatggagatctgaatttcataatcaagatattgtcattctttct
tatgatttattaagaaatgatattaaggatattgttgcttgtcaatcaaattggaattat
tgtattttagatgaaggtcatattattaagaataagaagactcaaattaccaaagctgtt
aaacaaattaaggctaatcacagattattactttcaggtactccaattcaaaataatgtt
ttagaattgtggtcattatttgattttttaatgccaggatttttaggaacagaaaaggag
tttaatgccaagtacagtaaaccaattcaatcaagtagagatgctaaagcaaattctaaa
gaacaagcttcaggtacaattgctttacaaaatttacatagacaagtattacctttcctt
ttaagaagagttaaagaagatgttttacatgatttacctgaaaagattattcaagattat
tattgtgatctttcacctattcaatcaaaactttatgaattttttgcaaagaaggaaatt
tccaaagtttcacaagaattgaagagccaacaagaagacaaaaccaaagccaaggaaata
tctgaaaattcacatgtatttaaagctttgaaatatttgagaaagctttgtaatcatcca
tgtttggtattagaaccggatcatccaatgtatgaatctgtaacacaagaaatcaaacaa
caaggattagatgttagagatgttaatttatcaccaaaattattatcattgaaacaactt
ttaaatgattgtggtattggagcgggtaatagtgatgttgatagttctaatcaacatcgt
gttttaatattttgtcaattgaaacaaatgcttgatattattcaaaatgaattatttgct
aaatatatgccaaatgtaacatttatgagattggatggtgatgttgaaacaacaaagaga
tatgaaattgttacaaaatttaatagtgatccaactattgatgttttattattaactaca
aagattggtggtttaggattgaatcttacaggtgcagatactgtaatttttgttgaacat
gattggaatccatctgctgatttacaagctatggatagagcgcatcgtattggtcaaaag
aaagttgttaatgtttatagacttattactagaaacactttggaagaaaagattatgggt
ttacaaaagtttaaaacaaacatttcaaagagtgttattaataaggaaaatagtagttta
tcatctatggatacagatcaattggttgatttgttcaatttttcaggttcaaatggaaca
gattcatcatctgctgctcaacttgaaaaaccaaagaaatctggacttggacaacttatg
gaaacaatggaagattatgatcaagataagcaatatcaagattttaatctcaattctttt
atgaataatcagagcaaacataaataa
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