Naegleria gruberi: NAEGRDRAFT_38674
Help
Entry
NAEGRDRAFT_38674 CDS
T01241
Name
(RefSeq) DEXH box helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_38674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_38674
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NAEGRDRAFT_38674
Spliceosome [BR:
ngr03041
]
Complex C
Other components
Step II factors
NAEGRDRAFT_38674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
Motif
Other DBs
NCBI-GeneID:
8848550
NCBI-ProteinID:
XP_002678836
JGI:
Naegr1_38674
UniProt:
D2VAK5
LinkDB
All DBs
AA seq
601 aa
AA seq
DB search
MNVKLGEEVGYTIRFEDVSNPHKTKVKYLTDGMLLRESQIDPLLKKYSVIVLDEAHERTL
HTDVLFGVVKRLLKERDDLKVIIMSATLEAQSFSKFYDNAKILYVSGRQFPVDIYYTEQP
TSDYVDAAITTTFQIHLDEQSPTGESLGDILVFLTGQEEIEQVAKLLEQKAKMLPPEALK
LMVCPIFSSLPSEKQMEVFEPAPSGCRKVILATNIAETSITINGIRFVIDTGFVKSKAFN
PLNGMESLVLTPISKASARQRSGRAGRESSGKCFRLYTEEAYHSLDNFTIPEILRCNLST
VVLQLKSMGIEKVHKFDFMDKPPKESLKKSLETLYNLGALDERGNLTELGVKMAGFPLEP
MFAVSLLRSTEFGCTKEILDIVSMLSVESIFYAPYHKREEANKIKMKFASKTGDQLTLLN
AFREFNLVKKSAKEDIKKWCFDHYINYKSMTKVLDVRKQLRDYLMNLNYEISSCGKDLAM
VRKALCSGFFINVAVRVPNKRMYKTVTDNIEVRVHPSSVLVDPFPDCVLYNQMILTTKQY
IRDICSIEGEWLKDVVPPQYRNALWTQTANMLKETQEAKQTVEEKTNKNTKKQAYVVKHT
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaaattgggagaggaagttggttacacgattcgttttgaggatgtttctaat
ccacataaaactaaagttaaatatttaacagacggtatgctcttgagagaatcacaaatt
gatccattactcaaaaaatactctgtaattgtattggacgaagctcacgaaagaacttta
cacacagatgttcttttcggagttgttaaaagattactgaaagaaagagatgatttgaaa
gtaataatcatgagtgccactttggaagctcaatcattttctaaattttatgacaatgca
aagattttatacgtttctggtagacaatttcctgtagatatttactatactgaacaacca
acatctgactatgtcgatgctgcaattacaacaactttccaaatccatttagacgagcaa
tctccaacaggagaatcattaggtgatattctggtattcttgacaggtcaggaagaaatt
gaacaagttgccaagttactggaacaaaaagctaaaatgttacctcctgaagcccttaag
ttaatggtttgcccaatcttttcatctttaccttcagagaaacaaatggaagtattcgag
ccagcaccttcaggatgtagaaaagttattttggcaaccaatattgccgaaacatctatt
actattaatggtattagatttgttattgatacaggttttgtgaaatcaaaggctttcaat
cctttgaatggaatggaatctctggtgttaacaccaatttctaaggcctcagctagacaa
agatctggtagagctggtagagagtcgagtggtaaatgtttcagattatacaccgaggaa
gcatatcacagcttggataattttacaattccagaaattttgagatgcaatctttccact
gttgtgcttcaacttaaatctatgggtattgaaaaggttcacaagtttgattttatggat
aagccaccaaaggaatctctcaaaaaatcccttgaaacactttataatttgggtgctctt
gatgaaagaggtaatcttactgaactaggtgtaaaaatggctggattccctcttgaacca
atgtttgctgtttcgttattgagatcaacagaatttggatgtacaaaggaaattttggat
attgtttcaatgctttctgtagaatctattttctatgcgccttatcataagagagaggaa
gcaaacaaaatcaagatgaaatttgcctctaaaacaggtgatcaactcacacttttgaac
gctttcagagaattcaatttggtaaaaaagagtgccaaggaagatattaagaagtggtgt
ttcgaccactacatcaattacaaatccatgacaaaagtattggatgtcagaaaacaattg
agagactatttaatgaacctaaattatgaaatttcctcatgtggaaaagatttggcaatg
gttagaaaagcattatgctctggatttttcataaatgttgctgttagagttccaaacaag
agaatgtacaaaacagtgacagataatattgaggtcagagtccatccatccagtgttttg
gtagacccattcccagattgtgtattgtacaatcaaatgattttaacaactaagcaatat
attagagatatttgttcaattgaaggagaatggttgaaagatgtagttccacctcaatat
agaaatgctctttggactcaaactgctaacatgttaaaagaaactcaagaagccaaacaa
acagttgaagaaaaaacaaacaaaaacaccaagaagcaagcctatgtcgttaaacacact
ccataa
DBGET
integrated database retrieval system
