Naegleria gruberi: NAEGRDRAFT_44642
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Entry
NAEGRDRAFT_44642 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03030
DNA replication
ngr03410
Base excision repair
ngr03420
Nucleotide excision repair
ngr03430
Mismatch repair
ngr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAEGRDRAFT_44642
03410 Base excision repair
NAEGRDRAFT_44642
03420 Nucleotide excision repair
NAEGRDRAFT_44642
03430 Mismatch repair
NAEGRDRAFT_44642
03440 Homologous recombination
NAEGRDRAFT_44642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngr03032
]
NAEGRDRAFT_44642
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_44642
Enzymes [BR:
ngr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAEGRDRAFT_44642
DNA replication proteins [BR:
ngr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
NAEGRDRAFT_44642
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
NAEGRDRAFT_44642
MMR (mismatch excision repair)
DNA polymerase delta complex
NAEGRDRAFT_44642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
DNA_pol_B_2
REV3_N
Motif
Other DBs
NCBI-GeneID:
8852902
NCBI-ProteinID:
XP_002675558
JGI:
Naegr1_44642
UniProt:
D2VK78
LinkDB
All DBs
AA seq
1019 aa
AA seq
DB search
MDADYTLAEQKPGYPGPASGNVPIVRLYGVTEEGFSVACHVRGYTPYFYIEQPENFNPDQ
CRNFAQFLNARMSERGIKKAGKVDEYVVNVSIEKKKSLMHYAFDTKKSFLRIEASIPPMV
PHIREFLEKGFNVPGIGFRKFLTYESNVLFVLRCMIDSNIFGANWVELPAGTYKWRNEND
KTSHAQIEVDISYEDLISHAPTEEGWHKIAPLRTLSFDIECKGKDGHFPQAESDPVIVIS
NYVTVQGKSEPLIKNILCLGDCAPIVGVEIHCFKTEKEMLETWRNFVIGIDPDIITGYNV
INFDLPYLINRAKALKSGSFPFLGRIAGKRSQMKNSTFSSKAYGTRESKDINIEGRIQLD
VMQAIQRDHKLSSYTLNSVSAHFLGDQKEEVHHSIISTLHEGSDEDRRRLASYCLKDAFL
PIRLLEKLLIIINYIEMARVTGIPVSFILKRGQQIKVISQLLRKAKKEEYLMPTISKSGK
KESLDEEGETSEETYEGGFVLSPKTGYYDIPITTLDFASLYPSIMIAHNLCYTTLLKKED
LAKLSEDQYVKTPSGDYFIKREVQQGLLPLVLEELLQARKQAKKDMDKATDPLEKAVMNG
RQLALKISANSVYGFTGAQVGMLPCLEISQSVTSFGREMIQHTKEMVEENYTIKNGYETN
AVVIYGDTDSVMVKFGTKDIRKAMELGLHASQEISKTFVKPIKLEFEKVYYPYLLLSKKR
YAGLLWTKPEKFDKMDAKGIVTVRRDNCALVRNLVNTCLHLILIKRSIESAVNYAKSVIS
DLLMNRMDISMLVITKALVKKSDKYKAKQSHVELAERMSKRDPLTAPRVGDRIPYVIVKA
HKGAKAYEKSEDPIWVLENSIPIDAQYYLEHQIKKPLEQIFQPIIDNTQSLFSGDHTRQI
AVPTPSKGGIMKFAQKQLRCLGCKVVLPKNGGTTICSDCSQKGVAPKIYESAINKRNHYE
DIYSRVWTHCQRCQGSLHSDVLCTNRDCPVFYMRKKVQKELADNQEILNRFDEEVIHDF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgattatacattagccgaacaaaaaccaggctatccaggacctgcatcaggc
aacgtacctattgttcgtttgtatggtgttactgaagaagggttctctgtggcatgtcac
gtcagaggttatacaccttacttttatattgaacaaccagaaaatttcaatcctgatcaa
tgtagaaactttgcacaatttttgaatgctagaatgtccgaacgaggtatcaagaaggca
ggtaaagttgacgaatatgttgtgaatgttagtattgaaaagaagaagagtttgatgcat
tatgcatttgataccaaaaaatcatttttaagaattgaagctagtatccctcctatggtt
cctcacattagagaattccttgaaaagggttttaacgttcctggtattgggtttagaaaa
ttcctcacatatgaaagtaacgttctgtttgttttacgttgcatgattgattcgaatatt
tttggtgctaattgggtagagcttccagcaggtacatacaagtggagaaatgaaaatgat
aagactagtcatgctcaaattgaagttgatatttcatatgaagatttaataagtcatgcc
ccaacagaagaaggctggcacaagattgcacctctcagaactctttcatttgatattgaa
tgtaaaggtaaagatggtcactttcctcaagctgaatcagatcctgtaattgttatttcc
aattatgttactgttcaaggtaaatcagaaccactcatcaagaatattttgtgtttagga
gattgtgcaccaatagttggtgtagaaatccattgtttcaagactgaaaaagaaatgtta
gaaacttggagaaatttcgttattggtatcgatcctgatattattacaggttacaacgtt
attaactttgacttaccttatttaattaacagagccaaagctttaaagtctggttccttc
ccattccttggtcgtattgctggtaagagatctcaaatgaaaaatagtaccttttcttca
aaagcatacggtaccagagaaagtaaggatattaatattgaaggtagaatccaactcgac
gttatgcaagcaattcaaagagaccacaaactttcctcatacactttgaactcggtatca
gctcatttccttggtgatcaaaaagaagaagttcaccactctattatttctacacttcat
gagggtagtgatgaagatagaagaagattagcttcatactgtcttaaagatgctttcctt
ccaattagacttttggagaaattgttgattattattaattatattgaaatggctcgtgtt
actggcattccagtttcttttattttaaagagaggtcagcaaattaaggttatttctcaa
ttgttgagaaaagctaagaaggaagaatatttaatgccaactatttctaaaagtggaaag
aaggaatcacttgatgaagaaggtgaaacatcagaagagacttatgaaggtggtttcgtt
ttgtcaccaaaaactggctattatgacattccaatcacaactcttgactttgcttctctg
tatccatccattatgattgctcacaatttatgttatactaccctcttaaagaaagaagat
ttggccaaattgagtgaagatcaatatgtaaaaactcctagtggtgactattttatcaag
agagaagttcaacaaggtttacttccacttgttttagaagaactcttacaggcaagaaaa
caagctaaaaaggatatggacaaggcaaccgatcctcttgaaaaggctgttatgaatggt
agacagcttgccttgaagatcagtgccaactctgtgtacggtttcactggtgcccaagtc
ggtatgcttccttgtcttgaaatttcacaatctgtaacttcttttggtagagaaatgatt
caacacacaaaggaaatggttgaagaaaattatactattaagaatggttatgaaactaat
gctgttgttatttatggtgacacagactctgtcatggtaaagtttggtacaaaggatatc
aggaaagcgatggaacttggtcttcatgcttctcaagaaatttcaaagacttttgtcaaa
cccatcaaacttgaatttgaaaaagtttattatccatatttacttttgtccaagaagaga
tatgctggtttgttgtggacaaaaccagaaaagttcgataagatggacgctaagggtatt
gtcacagtcagaagagacaactgtgccttggtgagaaaccttgtaaatacttgcctccat
ttaattttgattaagaggagtattgaatctgctgtaaattatgccaaatcagtaatttct
gatctgttgatgaacagaatggatatcagtatgctggttattacaaaagctctagtcaag
aagagtgataaatacaaagctaaacaatctcacgttgagcttgcagaaagaatgagtaag
agagatcctttaactgcacctcgtgtcggtgacagaattccatatgttatagttaaagct
cacaaaggtgctaaagcttatgaaaagagtgaagatcctatctgggttttagaaaatagt
attccaatcgatgcacaatattacttggaacatcaaattaagaaacctctcgaacaaatt
ttccaacctattattgataacacacaatcactctttagtggtgatcacaccagacaaatt
gcagtaccaacaccttccaaaggaggtattatgaagtttgctcaaaagcaattaagatgt
cttggatgtaaagttgttcttccaaagaatggtggtacaacaatttgttctgattgttct
caaaaaggtgtagctccaaaaatttatgaatctgccatcaataagagaaaccactatgaa
gatatttacagtagagtttggactcactgccaaagatgccaaggtagtttgcactctgat
gttctttgtacaaatagagattgtccagtcttttatatgagaaagaaagtacaaaaagaa
ttggcagacaatcaagaaattcttaaccgattcgatgaagaagttattcatgatttttaa
DBGET
integrated database retrieval system
